Variant report

Variant	rs35279255
Chromosome Location	chr1:62082931-62082932
allele	-/A
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 43 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:43 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv994970	chr1:61693951-62199657	Strong transcription Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
2	nsv1006142	chr1:61696142-62119763	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
3	nsv534980	chr1:61696142-62119763	Enhancers Flanking Active TSS Active TSS Strong transcription Weak transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
4	nsv916868	chr1:61700430-62119762	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
5	nsv1001052	chr1:61702011-62090670	Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases
6	nsv817402	chr1:61703965-62119762	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
7	nsv1010797	chr1:61703966-62125970	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Strong transcription Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
8	nsv530494	chr1:61723918-62084045	Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases
9	nsv1000294	chr1:61746280-62350718	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
10	esv1824403	chr1:62080228-62083557	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
11	esv1824803	chr1:62080228-62083557	Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
12	esv1827051	chr1:62080228-62083557	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
13	esv3436036	chr1:62080864-62085662	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases
14	nsv820220	chr1:62081243-62083737	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases
15	esv3487874	chr1:62081664-62084862	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases
16	esv3422084	chr1:62081889-62084737	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases
17	esv3487876	chr1:62082114-62084712	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases
18	esv2508963	chr1:62082368-62083879	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
19	esv3320059	chr1:62082473-62083978	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
20	esv6698	chr1:62082624-62083960	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
21	esv2291987	chr1:62082688-62083888	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
22	esv3320058	chr1:62082748-62083805	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
23	esv3487881	chr1:62082757-62083768	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
24	esv3487873	chr1:62082764-62083782	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
25	esv3487879	chr1:62082777-62083735	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
26	nsv822954	chr1:62082781-62083828	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
27	nsv820380	chr1:62082781-62083868	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
28	esv3320061	chr1:62082785-62083771	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
29	esv3320057	chr1:62082790-62083770	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
30	esv3487878	chr1:62082791-62083748	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
31	esv3487877	chr1:62082799-62083751	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
32	esv3320060	chr1:62082802-62083726	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
33	esv10947	chr1:62082811-62083739	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
34	esv3448163	chr1:62082819-62083721	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
35	esv3320063	chr1:62082844-62083706	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
36	esv3487880	chr1:62082854-62083710	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
37	nsv160205	chr1:62082858-62083701	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
38	esv3320064	chr1:62082858-62083708	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
39	esv3487882	chr1:62082858-62083708	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
40	nsv546371	chr1:62082921-62083431	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
41	nsv546372	chr1:62082921-62083487	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
42	nsv546373	chr1:62082921-62083557	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
43	esv1808262	chr1:62082921-62083960	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:62073200-62084400	Weak transcription	Esophagus	oesophagus
2	chr1:62073200-62086400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr1:62073200-62098800	Weak transcription	Right Atrium	heart
4	chr1:62073400-62084200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr1:62079200-62086000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr1:62080400-62086000	Weak transcription	Primary monocytes fromperipheralblood	blood
7	chr1:62080400-62086000	Weak transcription	Monocytes-CD14+_RO01746	blood
8	chr1:62080600-62084400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr1:62081800-62083000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr1:62082200-62083000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr1:62082400-62083200	Weak transcription	Aorta	Aorta
12	chr1:62082800-62083800	Weak transcription	HUES48 Cell Line	embryonic stem cell
13	chr1:62082800-62084000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
14	chr1:62082800-62084200	Weak transcription	NHEK	skin
15	chr1:62082800-62084400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr1:62082800-62084400	Weak transcription	HMEC	breast

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