The 2.0 version of rSNPBase

Variant report

Variant rs35405772
Chromosome Location chr1:95322949-95322950
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95301800-95328600 Strong transcription Fetal Intestine Large intestine
2 chr1:95312800-95328200 Weak transcription Fetal Lung lung
3 chr1:95315200-95328000 Weak transcription Gastric stomach
4 chr1:95320400-95323000 Enhancers Placenta Placenta
5 chr1:95320400-95327800 Weak transcription HepG2 liver
6 chr1:95320400-95329400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr1:95320600-95325000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr1:95320800-95324800 Weak transcription Ovary ovary
9 chr1:95320800-95325000 Weak transcription Right Atrium heart
10 chr1:95320800-95325400 Weak transcription Brain Angular Gyrus brain
11 chr1:95320800-95326000 Weak transcription Adipose Nuclei Adipose
12 chr1:95320800-95326200 Weak transcription Aorta Aorta
13 chr1:95320800-95327800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr1:95320800-95327800 Weak transcription Esophagus oesophagus
15 chr1:95320800-95327800 Weak transcription Pancreas Pancrea
16 chr1:95320800-95328600 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr1:95321000-95324000 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr1:95321000-95324800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr1:95321000-95325000 Weak transcription Fetal Stomach stomach
20 chr1:95321000-95325400 Weak transcription Brain Inferior Temporal Lobe brain
21 chr1:95321000-95325400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr1:95321000-95325400 Weak transcription Brain Substantia Nigra brain
23 chr1:95321000-95327800 Weak transcription Lung lung
24 chr1:95321000-95328000 Weak transcription Right Ventricle heart
25 chr1:95321000-95328400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr1:95321200-95323800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr1:95321200-95323800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr1:95321200-95324800 Weak transcription Brain Cingulate Gyrus brain
29 chr1:95321200-95325200 Weak transcription Brain Anterior Caudate brain
30 chr1:95321200-95325200 Weak transcription NHLF lung
31 chr1:95321200-95326400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr1:95321200-95326400 Weak transcription Stomach Smooth Muscle stomach
33 chr1:95321200-95327400 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr1:95321200-95327600 Weak transcription Small Intestine intestine
35 chr1:95321200-95327600 Weak transcription HSMM muscle
36 chr1:95321200-95328000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr1:95321200-95328200 Weak transcription NHDF-Ad bronchial
38 chr1:95321200-95328200 Weak transcription Osteobl bone
39 chr1:95321200-95328400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr1:95321200-95329800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr1:95321400-95324000 Weak transcription NH-A brain
42 chr1:95321400-95324600 Weak transcription Duodenum Mucosa Duodenum
43 chr1:95321400-95325600 Weak transcription HSMMtube muscle
44 chr1:95321400-95325800 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr1:95321400-95327200 Weak transcription Colon Smooth Muscle Colon
46 chr1:95321400-95327800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr1:95321400-95328400 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr1:95321400-95330600 Weak transcription Brain Hippocampus Middle brain
49 chr1:95321600-95324600 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr1:95321600-95325400 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015