Variant report

Variant	rs35437297
Chromosome Location	chr16:70661631-70661632
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 56 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:56)

rs_ID	r²[population]
rs11865804	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11866403	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12596070	0.82[EUR][1000 genomes]
rs12596475	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12598248	0.84[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs12598251	0.84[AFR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12598456	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12598945	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12598955	0.85[ASN][1000 genomes]
rs12919296	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12919451	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12920334	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12920529	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12923477	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12923630	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12923637	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12924304	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12925493	0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12926402	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12929463	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12929508	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12935541	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13329733	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1551530	0.80[EUR][1000 genomes]
rs16970408	0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs33998678	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34426756	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34644948	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34692833	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34811595	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34881169	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35283920	0.84[EUR][1000 genomes]
rs35285555	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35290416	0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35381200	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs35794088	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs36097154	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3813905	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4985413	0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4985414	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4985415	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4985546	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4985549	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4985550	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4985551	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4985552	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs4985553	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs55872380	0.99[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs56220651	0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs57738457	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs61170208	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs68049363	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs71401818	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7191249	0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8060584	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8061329	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.82[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:70647400-70669200	Weak transcription	Right Atrium	heart
2	chr16:70647800-70664800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr16:70659200-70668800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
4	chr16:70661200-70669000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr16:70661400-70661800	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
6	chr16:70661400-70662000	Enhancers	iPS-18 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links