Variant report

Variant	rs35440270
Chromosome Location	chr3:143087107-143087108
allele	-/A
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949288	chr3:142793323-143585882	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
2	esv2757894	chr3:142992697-143285979	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	esv2759184	chr3:142992697-143285979	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
4	nsv877564	chr3:143059952-143116883	Strong transcription Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
5	nsv877565	chr3:143078986-143116883	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
6	nsv999000	chr3:143086325-143136128	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:143068200-143091800	Weak transcription	Lung	lung
2	chr3:143070200-143088600	Weak transcription	Aorta	Aorta
3	chr3:143071600-143102400	Weak transcription	Esophagus	oesophagus
4	chr3:143072000-143099400	Weak transcription	Ovary	ovary
5	chr3:143073400-143089600	Weak transcription	Psoas Muscle	Psoas
6	chr3:143077400-143104800	Weak transcription	Brain Hippocampus Middle	brain
7	chr3:143082400-143102200	Weak transcription	Primary B cells from cord blood	blood
8	chr3:143083000-143096600	Weak transcription	Primary T cells from cord blood	blood
9	chr3:143083200-143096000	Weak transcription	Primary T helper cells fromperipheralblood	blood
10	chr3:143083400-143087200	Weak transcription	Primary monocytes fromperipheralblood	blood
11	chr3:143083400-143098000	Weak transcription	Monocytes-CD14+_RO01746	blood
12	chr3:143084600-143087200	Weak transcription	Dnd41	blood
13	chr3:143085800-143103200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
14	chr3:143086200-143087400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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