Variant report

Variant rs35488797
Chromosome Location chr4:106888426-106888427
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:106868400-106892000 Weak transcription Duodenum Mucosa Duodenum
2 chr4:106881000-106890400 Weak transcription Small Intestine intestine
3 chr4:106885400-106909800 Weak transcription Aorta Aorta
4 chr4:106885600-106891600 Weak transcription Fetal Intestine Small intestine
5 chr4:106885600-106894000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr4:106886600-106888600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr4:106886600-106888600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
8 chr4:106886600-106888600 Enhancers Adipose Nuclei Adipose
9 chr4:106886600-106888600 Enhancers K562 blood
10 chr4:106886600-106888800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr4:106886600-106888800 Enhancers HSMMtube muscle
12 chr4:106886600-106889200 Enhancers Fetal Heart heart
13 chr4:106886600-106894600 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr4:106886800-106888600 Enhancers Placenta Placenta
15 chr4:106886800-106888800 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr4:106886800-106889200 Enhancers iPS-15b Cell Line embryonic stem cell
17 chr4:106887000-106888600 Enhancers Skeletal Muscle Male skeletal muscle
18 chr4:106887000-106888600 Enhancers Skeletal Muscle Female skeletal muscle
19 chr4:106887000-106888800 Enhancers H9 Cell Line embryonic stem cell
20 chr4:106887000-106888800 Enhancers Psoas Muscle Psoas
21 chr4:106887200-106888800 Enhancers HUES6 Cell Line embryonic stem cell
22 chr4:106887200-106889200 Enhancers HUES48 Cell Line embryonic stem cell
23 chr4:106887200-106889200 Enhancers HUES64 Cell Line embryonic stem cell
24 chr4:106887200-106889200 Enhancers iPS-18 Cell Line embryonic stem cell
25 chr4:106887200-106890400 Weak transcription Spleen Spleen
26 chr4:106887200-106892200 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr4:106887600-106890000 Weak transcription Fetal Intestine Large intestine
28 chr4:106887800-106888600 Enhancers Fetal Stomach stomach
29 chr4:106887800-106889400 Enhancers ES-I3 Cell Line embryonic stem cell
30 chr4:106888000-106888600 Enhancers H1 Cell Line embryonic stem cell
31 chr4:106888000-106888800 Strong transcription Cortex derived primary cultured neurospheres brain
32 chr4:106888200-106888600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr4:106888200-106888600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
34 chr4:106888200-106888600 Active TSS Fetal Kidney kidney
35 chr4:106888200-106888600 Genic enhancers Sigmoid Colon Sigmoid Colon
36 chr4:106888200-106888800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr4:106888200-106888800 Enhancers Fetal Muscle Leg muscle
38 chr4:106888400-106888600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr4:106888400-106888600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
40 chr4:106888400-106888600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr4:106888400-106888600 Enhancers Colonic Mucosa Colon
42 chr4:106888400-106888600 Flanking Active TSS Fetal Muscle Trunk muscle
43 chr4:106888400-106888600 Enhancers Lung lung
44 chr4:106888400-106888600 Enhancers Ovary ovary
45 chr4:106888400-106888600 Genic enhancers Pancreas Pancrea
46 chr4:106888400-106888800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
47 chr4:106888400-106888800 Enhancers Left Ventricle heart
48 chr4:106888400-106888800 Enhancers Right Atrium heart
49 chr4:106888400-106888800 Enhancers Right Ventricle heart
50 chr4:106888400-106889200 Enhancers iPS-20b Cell Line embryonic stem cell

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