Variant report
| Variant | rs35500947 |
|---|---|
| Chromosome Location | chr1:71190503-71190504 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr1:71185931..71188668-chr1:71189052..71190676,2 | K562 | blood: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000226208 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:54)
| rs_ID | r2[population] |
|---|---|
| rs1082034 | 0.94[ASN][1000 genomes] |
| rs10935287 | 0.90[ASN][1000 genomes] |
| rs11717771 | 0.91[ASN][1000 genomes] |
| rs12487652 | 0.89[ASN][1000 genomes] |
| rs12487694 | 0.94[ASN][1000 genomes] |
| rs12490633 | 0.88[ASN][1000 genomes] |
| rs12497070 | 0.89[ASN][1000 genomes] |
| rs12636246 | 0.83[EUR][1000 genomes];0.85[ASN][1000 genomes] |
| rs12636910 | 0.90[ASN][1000 genomes] |
| rs13098789 | 0.96[ASN][1000 genomes] |
| rs1625751 | 0.89[ASN][1000 genomes] |
| rs1672927 | 0.94[ASN][1000 genomes] |
| rs1672932 | 0.93[ASN][1000 genomes] |
| rs1672963 | 0.94[ASN][1000 genomes] |
| rs1673594 | 0.92[ASN][1000 genomes] |
| rs1673608 | 0.92[ASN][1000 genomes] |
| rs1673622 | 0.89[ASN][1000 genomes] |
| rs1720833 | 0.89[ASN][1000 genomes] |
| rs2086351 | 0.89[ASN][1000 genomes] |
| rs2607790 | 0.94[ASN][1000 genomes] |
| rs28719641 | 0.95[ASN][1000 genomes] |
| rs35471402 | 0.93[ASN][1000 genomes] |
| rs35932955 | 0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes] |
| rs3884240 | 0.93[ASN][1000 genomes] |
| rs4678266 | 0.90[ASN][1000 genomes] |
| rs4894389 | 0.94[ASN][1000 genomes] |
| rs497334 | 0.93[ASN][1000 genomes] |
| rs503922 | 0.88[ASN][1000 genomes] |
| rs529615 | 0.88[ASN][1000 genomes] |
| rs537210 | 0.94[ASN][1000 genomes] |
| rs542010 | 0.94[ASN][1000 genomes] |
| rs56394118 | 1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes] |
| rs564800 | 0.94[ASN][1000 genomes] |
| rs582386 | 0.94[ASN][1000 genomes] |
| rs609797 | 0.93[ASN][1000 genomes] |
| rs612471 | 0.94[ASN][1000 genomes] |
| rs620035 | 0.94[ASN][1000 genomes] |
| rs6439809 | 0.93[ASN][1000 genomes] |
| rs6439810 | 0.96[ASN][1000 genomes] |
| rs656107 | 0.86[ASN][1000 genomes] |
| rs6762114 | 0.96[ASN][1000 genomes] |
| rs6771237 | 0.96[ASN][1000 genomes] |
| rs73229526 | 0.96[ASN][1000 genomes] |
| rs7626226 | 0.93[ASN][1000 genomes] |
| rs7645920 | 0.93[ASN][1000 genomes] |
| rs773443 | 0.90[ASN][1000 genomes] |
| rs773450 | 0.90[ASN][1000 genomes] |
| rs774011 | 0.89[ASN][1000 genomes] |
| rs774012 | 0.89[ASN][1000 genomes] |
| rs814022 | 0.94[ASN][1000 genomes] |
| rs936316 | 0.92[ASN][1000 genomes] |
| rs9822037 | 0.93[ASN][1000 genomes] |
| rs9823182 | 0.96[ASN][1000 genomes] |
| rs9855306 | 0.89[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:71184000-71193000 | Weak transcription | Aorta | Aorta |
