The 2.0 version of rSNPBase

Variant report

Variant rs35548330
Chromosome Location chr12:105030351-105030352
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:104989400-105030600 Strong transcription Dnd41 blood
2 chr12:104998800-105031400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
3 chr12:105006200-105034800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr12:105010200-105031600 Weak transcription Primary T helper cells PMA-I stimulated --
5 chr12:105013800-105037000 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr12:105016000-105031400 Weak transcription GM12878-XiMat blood
7 chr12:105017000-105036000 Weak transcription Primary T helper cells fromperipheralblood blood
8 chr12:105018200-105031600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr12:105020400-105031400 Weak transcription A549 lung
10 chr12:105020800-105037800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr12:105021000-105032800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr12:105021000-105037800 Weak transcription NHEK skin
13 chr12:105022000-105030800 Weak transcription Right Atrium heart
14 chr12:105022400-105048200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr12:105022800-105031400 Weak transcription Primary B cells from peripheral blood blood
16 chr12:105022800-105043200 Weak transcription Brain Hippocampus Middle brain
17 chr12:105023000-105036800 Weak transcription Primary T cells from cord blood blood
18 chr12:105023200-105031600 Weak transcription Primary B cells from cord blood blood
19 chr12:105024600-105031600 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr12:105024600-105044200 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr12:105024800-105038200 Weak transcription Brain Cingulate Gyrus brain
22 chr12:105025400-105030600 Weak transcription Primary hematopoietic stem cells blood
23 chr12:105026200-105033200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr12:105026600-105031800 Weak transcription Stomach Smooth Muscle stomach
25 chr12:105026800-105031400 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr12:105026800-105031400 Weak transcription Left Ventricle heart
27 chr12:105026800-105031600 Weak transcription Small Intestine intestine
28 chr12:105026800-105031800 Weak transcription Fetal Brain Male brain
29 chr12:105026800-105036800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr12:105027000-105030400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
31 chr12:105027000-105030800 Weak transcription Primary T cells fromperipheralblood blood
32 chr12:105027000-105031400 Weak transcription Adipose Nuclei Adipose
33 chr12:105027000-105032200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr12:105027200-105032200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr12:105027600-105038000 Weak transcription Colonic Mucosa Colon
36 chr12:105027800-105031400 Weak transcription Lung lung
37 chr12:105027800-105037800 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr12:105028000-105031400 Weak transcription Brain Anterior Caudate brain
39 chr12:105028200-105031400 Weak transcription K562 blood
40 chr12:105028400-105031400 Weak transcription Spleen Spleen
41 chr12:105028400-105034400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr12:105028600-105031200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr12:105029000-105031400 Weak transcription Fetal Adrenal Gland Adrenal Gland
44 chr12:105029000-105032800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
45 chr12:105029400-105033200 Weak transcription Fetal Thymus thymus
46 chr12:105029600-105032400 Weak transcription HSMMtube muscle
47 chr12:105029600-105034600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr12:105029800-105030400 Genic enhancers Primary hematopoietic stem cells short term culture blood
49 chr12:105029800-105030400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr12:105029800-105031400 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015