Variant report

Variant	rs35655276
Chromosome Location	chr7:128368628-128368629
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:128356625..128358550-chr7:128367643..128370229,2	K562	blood:
2	chr7:128337315..128339391-chr7:128367756..128370722,2	K562	blood:
3	chr7:128353684..128356694-chr7:128364624..128368743,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000252866	Chromatin interaction
ENSG00000135248	Chromatin interaction
ENSG00000201041	Chromatin interaction

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs339065	0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv427806	chr7:128179989-128428182	ZNF genes & repeats Enhancers Strong transcription Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
2	nsv1016979	chr7:128333070-128534438	Active TSS Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:128349400-128378600	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr7:128349800-128378200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr7:128349800-128378400	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr7:128361600-128378600	Weak transcription	Right Atrium	heart
5	chr7:128366200-128374400	Weak transcription	Primary B cells from peripheral blood	blood
6	chr7:128366800-128369200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr7:128366800-128369400	Enhancers	HMEC	breast
8	chr7:128366800-128369600	Enhancers	NHEK	skin
9	chr7:128367000-128369000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr7:128367000-128370200	Enhancers	HSMM	muscle
11	chr7:128367200-128369200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr7:128367400-128369000	Weak transcription	Fetal Brain Male	brain
13	chr7:128367400-128370000	Weak transcription	Spleen	Spleen
14	chr7:128367600-128368800	Weak transcription	Fetal Brain Female	brain
15	chr7:128367600-128368800	Weak transcription	Fetal Lung	lung
16	chr7:128367800-128368800	Weak transcription	HSMMtube	muscle
17	chr7:128368400-128369000	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
18	chr7:128368400-128369200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
19	chr7:128368400-128370000	Enhancers	Muscle Satellite Cultured Cells	--
20	chr7:128368400-128372600	Weak transcription	H9 Cell Line	embryonic stem cell
21	chr7:128368600-128368800	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
22	chr7:128368600-128368800	Enhancers	Cortex derived primary cultured neurospheres	brain
23	chr7:128368600-128368800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
24	chr7:128368600-128368800	Flanking Active TSS	Osteobl	bone
25	chr7:128368600-128369200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
26	chr7:128368600-128369600	Enhancers	NH-A	brain

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