The 2.0 version of rSNPBase

Variant report

Variant rs35678857
Chromosome Location chr13:95222890-95222891
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:95202800-95223600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr13:95209400-95225000 Weak transcription HepG2 liver
3 chr13:95209800-95223000 Weak transcription HUVEC blood vessel
4 chr13:95210800-95225000 Weak transcription K562 blood
5 chr13:95211400-95223000 Weak transcription Small Intestine intestine
6 chr13:95211800-95224000 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr13:95212200-95223600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr13:95212400-95223400 Weak transcription HSMM muscle
9 chr13:95212600-95223600 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr13:95212800-95225000 Weak transcription Placenta Amnion Placenta Amnion
11 chr13:95215000-95235400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr13:95217800-95225400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr13:95218000-95223000 Weak transcription Brain Cingulate Gyrus brain
14 chr13:95218000-95223200 Weak transcription NHEK skin
15 chr13:95218200-95223200 Weak transcription NHLF lung
16 chr13:95218400-95232800 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr13:95219200-95238200 Strong transcription Primary T cells from cord blood blood
18 chr13:95219400-95223000 Weak transcription Brain Substantia Nigra brain
19 chr13:95219600-95223000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr13:95219600-95237000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr13:95219600-95245600 Strong transcription Primary hematopoietic stem cells short term culture blood
22 chr13:95220200-95225600 Strong transcription Primary B cells from cord blood blood
23 chr13:95220600-95224200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr13:95220600-95227800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr13:95220800-95223000 Weak transcription Rectal Smooth Muscle rectum
26 chr13:95220800-95223400 Weak transcription Brain Angular Gyrus brain
27 chr13:95220800-95225600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr13:95220800-95226200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr13:95220800-95227800 Strong transcription Thymus Thymus
30 chr13:95220800-95229200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr13:95220800-95231000 Strong transcription Liver Liver
32 chr13:95220800-95237000 Strong transcription GM12878-XiMat blood
33 chr13:95220800-95237600 Strong transcription Fetal Intestine Large intestine
34 chr13:95221000-95223000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr13:95221000-95223600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr13:95221000-95223600 Weak transcription Stomach Mucosa stomach
37 chr13:95221000-95226200 Strong transcription Fetal Stomach stomach
38 chr13:95221000-95237000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr13:95221000-95238000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
40 chr13:95221000-95240000 Strong transcription Fetal Thymus thymus
41 chr13:95221000-95241000 Strong transcription Dnd41 blood
42 chr13:95221200-95223000 Weak transcription iPS-20b Cell Line embryonic stem cell
43 chr13:95221200-95223000 Weak transcription Pancreatic Islets Pancreatic Islet
44 chr13:95221200-95235600 Strong transcription Adipose Nuclei Adipose
45 chr13:95221200-95236600 Strong transcription Primary T regulatory cells fromperipheralblood blood
46 chr13:95221200-95237400 Strong transcription Duodenum Mucosa Duodenum
47 chr13:95221200-95238000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr13:95221200-95239200 Weak transcription Brain Germinal Matrix brain
49 chr13:95221400-95223000 Weak transcription Fetal Brain Female brain
50 chr13:95221400-95223200 Weak transcription Brain Hippocampus Middle brain

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Last update: Aug 31, 2015