Variant report

Variant	rs35689084
Chromosome Location	chr8:67424301-67424302
allele	-/A
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:12)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:12 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:67423189..67428522-chr8:67623234..67628071,7	MCF-7	breast:
2	chr8:67417099..67419629-chr8:67424131..67426273,2	MCF-7	breast:
3	chr8:67398115..67399973-chr8:67424030..67426495,2	MCF-7	breast:
4	chr8:67422088..67426308-chr8:67518696..67523583,8	MCF-7	breast:
5	chr8:67424089..67425027-chr8:67520588..67521105,2	MCF-7	breast:
6	chr8:67421561..67429070-chr8:67518939..67527775,32	MCF-7	breast:
7	chr8:67424158..67425815-chr8:67434087..67435662,5	MCF-7	breast:
8	chr8:67345421..67347646-chr8:67424128..67426947,2	MCF-7	breast:
9	chr8:67424259..67425739-chr8:67434384..67435598,12	MCF-7	breast:
10	chr8:67422601..67431884-chr8:67622296..67628668,31	MCF-7	breast:
11	chr8:67424243..67425486-chr8:67521356..67522211,7	MCF-7	breast:
12	chr8:67423253..67428167-chr8:67524174..67527584,6	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000104205	Chromatin interaction
ENSG00000185697	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	nsv516599	chr8:67423997-67432106	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	Chromatin interactive region miRNA target site	12 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:74 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:67414800-67424400	Weak transcription	Hela-S3	cervix
2	chr8:67416000-67424400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr8:67419800-67424600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr8:67419800-67430000	Weak transcription	Psoas Muscle	Psoas
5	chr8:67420000-67424400	Weak transcription	HUES6 Cell Line	embryonic stem cell
6	chr8:67420000-67424400	Weak transcription	HUES64 Cell Line	embryonic stem cell
7	chr8:67420000-67424400	Weak transcription	Fetal Kidney	kidney
8	chr8:67420000-67427600	Weak transcription	Liver	Liver
9	chr8:67420400-67424400	Weak transcription	HUES48 Cell Line	embryonic stem cell
10	chr8:67420400-67424400	Weak transcription	HUVEC	blood vessel
11	chr8:67420400-67424600	Weak transcription	Fetal Lung	lung
12	chr8:67420600-67424400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr8:67420600-67424400	Weak transcription	Ovary	ovary
14	chr8:67420600-67424400	Weak transcription	NH-A	brain
15	chr8:67420600-67424400	Weak transcription	Osteobl	bone
16	chr8:67420600-67424600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
17	chr8:67420600-67424600	Weak transcription	Colon Smooth Muscle	Colon
18	chr8:67420600-67424600	Weak transcription	Right Atrium	heart
19	chr8:67420600-67425400	Weak transcription	Primary T helper cells fromperipheralblood	blood
20	chr8:67420600-67425600	Weak transcription	Primary T helper cells PMA-I stimulated	--
21	chr8:67420800-67424400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
22	chr8:67420800-67424400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr8:67420800-67424400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
24	chr8:67420800-67424400	Weak transcription	Left Ventricle	heart
25	chr8:67420800-67424400	Weak transcription	Pancreas	Pancrea
26	chr8:67420800-67424400	Weak transcription	Right Ventricle	heart
27	chr8:67420800-67424400	Weak transcription	Spleen	Spleen
28	chr8:67420800-67424400	Weak transcription	NHEK	skin
29	chr8:67420800-67424400	Weak transcription	NHLF	lung
30	chr8:67420800-67424600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
31	chr8:67421000-67424400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
32	chr8:67421000-67424400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
33	chr8:67421000-67424400	Weak transcription	A549	lung
34	chr8:67421000-67424400	Weak transcription	NHDF-Ad	bronchial
35	chr8:67421000-67424600	Weak transcription	Placenta Amnion	Placenta Amnion
36	chr8:67421000-67426000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
37	chr8:67421200-67424600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
38	chr8:67421400-67424400	Weak transcription	Rectal Smooth Muscle	rectum
39	chr8:67421600-67424800	Enhancers	Skeletal Muscle Male	skeletal muscle
40	chr8:67422200-67424400	Weak transcription	GM12878-XiMat	blood
41	chr8:67422600-67424600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
42	chr8:67422800-67424400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr8:67422800-67425000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
44	chr8:67423000-67424600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
45	chr8:67423200-67424400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
46	chr8:67423200-67424800	Enhancers	Breast Myoepithelial Primary Cells	Breast
47	chr8:67423200-67427200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
48	chr8:67423200-67427800	Enhancers	Fetal Heart	heart
49	chr8:67423400-67424400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
50	chr8:67423400-67424400	Enhancers	Brain Anterior Caudate	brain

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