Variant report

Variant	rs35719876
Chromosome Location	chr16:75849138-75849139
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr16:75849049..75850691-chr16:75853844..75855427,2	K562	blood:

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs11149861	0.92[ASN][1000 genomes]
rs16943551	0.95[EUR][1000 genomes]
rs16943558	0.91[EUR][1000 genomes]
rs28647452	0.92[ASN][1000 genomes]
rs4262972	0.92[ASN][1000 genomes]
rs4267335	0.92[ASN][1000 genomes]
rs4349174	0.92[ASN][1000 genomes]
rs4991730	0.92[ASN][1000 genomes]
rs6564291	0.92[ASN][1000 genomes]
rs6564292	0.92[ASN][1000 genomes]
rs7186048	0.85[ASN][1000 genomes]
rs7187903	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7191959	1.00[ASN][1000 genomes]
rs7192895	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7200970	0.92[ASN][1000 genomes]
rs7203185	0.92[ASN][1000 genomes]
rs7203198	0.92[ASN][1000 genomes]
rs7203789	0.92[ASN][1000 genomes]
rs73618806	0.92[ASN][1000 genomes]
rs73618809	0.92[ASN][1000 genomes]
rs73618810	0.92[ASN][1000 genomes]
rs8047559	0.92[ASN][1000 genomes]
rs8047752	0.92[ASN][1000 genomes]
rs8049180	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs8058108	1.00[ASN][1000 genomes]
rs9319489	0.91[EUR][1000 genomes]
rs9927143	0.93[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532562	chr16:75614947-76371158	Weak transcription Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
2	nsv1064880	chr16:75628562-75895699	Enhancers Genic enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
3	nsv542960	chr16:75628562-75895699	ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
4	nsv906930	chr16:75728261-75872464	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
5	nsv1064607	chr16:75787129-76449101	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
6	nsv1065794	chr16:75792288-76434118	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
7	nsv542961	chr16:75792288-76434118	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
8	nsv1066506	chr16:75798379-75853388	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:75845000-75852200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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