| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv873203 |
chr1:222332906-222775000 |
Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
17 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv999185 |
chr1:222500725-223278032 |
Strong transcription Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
45 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv535304 |
chr1:222500725-223278032 |
Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
45 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
esv17973 |
chr1:222639039-222693573 |
Active TSS Flanking Active TSS Enhancers Weak transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
11 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv945308 |
chr1:222641166-222651071 |
Enhancers Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv945307 |
chr1:222641166-222693294 |
Weak transcription Enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
5 gene(s)
|
inside rSNPs
|
diseases
|
