Variant report

Variant	rs35748407
Chromosome Location	chr6:113805485-113805486
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs17180247	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs34181506	0.83[EUR][1000 genomes]
rs35702691	0.84[EUR][1000 genomes]
rs35941847	0.84[EUR][1000 genomes]
rs58061464	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916294	chr6:113518489-113904305	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
2	nsv522088	chr6:113788356-113809585	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:113801200-113810200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr6:113803200-113807200	Weak transcription	Primary monocytes fromperipheralblood	blood
3	chr6:113803200-113807200	Enhancers	Primary neutrophils fromperipheralblood	blood
4	chr6:113803200-113807200	Weak transcription	Monocytes-CD14+_RO01746	blood
5	chr6:113804400-113807400	Weak transcription	HepG2	liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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