The 2.0 version of rSNPBase

Variant report

Variant rs35754457
Chromosome Location chr13:50492845-50492846
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:50476400-50497400 Weak transcription Pancreas Pancrea
2 chr13:50477800-50499600 Weak transcription Brain Inferior Temporal Lobe brain
3 chr13:50478000-50495200 Weak transcription Brain Hippocampus Middle brain
4 chr13:50479600-50508600 Weak transcription K562 blood
5 chr13:50479800-50500000 Weak transcription Colon Smooth Muscle Colon
6 chr13:50480800-50508800 Weak transcription Fetal Brain Male brain
7 chr13:50481800-50509600 Weak transcription Right Ventricle heart
8 chr13:50482600-50509600 Weak transcription Primary B cells from cord blood blood
9 chr13:50484000-50509600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr13:50484200-50494000 Weak transcription HUES6 Cell Line embryonic stem cell
11 chr13:50484400-50493600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr13:50484400-50501800 Weak transcription HSMMtube muscle
13 chr13:50484400-50509400 Weak transcription Fetal Kidney kidney
14 chr13:50484600-50493000 Weak transcription Placenta Amnion Placenta Amnion
15 chr13:50484600-50495200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr13:50484600-50509600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr13:50485000-50493000 Weak transcription Primary B cells from peripheral blood blood
18 chr13:50485000-50493400 Weak transcription Lung lung
19 chr13:50485000-50499400 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr13:50485200-50495200 Weak transcription Small Intestine intestine
21 chr13:50485800-50501800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr13:50485800-50506200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr13:50485800-50509200 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr13:50486000-50496200 Strong transcription Skeletal Muscle Female skeletal muscle
25 chr13:50486000-50503400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr13:50486000-50503400 Strong transcription Liver Liver
27 chr13:50486000-50509400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
28 chr13:50486400-50495000 Weak transcription Fetal Brain Female brain
29 chr13:50486400-50495200 Weak transcription Brain Substantia Nigra brain
30 chr13:50486400-50509600 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr13:50486600-50508800 Weak transcription Hela-S3 cervix
32 chr13:50487400-50509400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr13:50487600-50509400 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr13:50487800-50496800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
35 chr13:50488000-50500400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr13:50488400-50509600 Weak transcription Colonic Mucosa Colon
37 chr13:50488600-50495200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr13:50488800-50495200 Weak transcription Psoas Muscle Psoas
39 chr13:50488800-50495200 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr13:50488800-50495200 Weak transcription GM12878-XiMat blood
41 chr13:50488800-50497800 Weak transcription A549 lung
42 chr13:50489000-50494000 Weak transcription Brain Germinal Matrix brain
43 chr13:50489200-50509600 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr13:50489200-50510000 Weak transcription Spleen Spleen
45 chr13:50489600-50496000 Strong transcription Sigmoid Colon Sigmoid Colon
46 chr13:50489600-50501000 Strong transcription Osteobl bone
47 chr13:50489600-50502400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr13:50489600-50503200 Strong transcription Adipose Nuclei Adipose
49 chr13:50489600-50504200 Strong transcription Fetal Intestine Large intestine
50 chr13:50490000-50495200 Weak transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015