Variant report

Variant	rs35761259
Chromosome Location	chr14:70681911-70681912
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10459537	0.90[AFR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1115250	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11625280	0.93[AFR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11627378	0.84[EUR][1000 genomes]
rs11629177	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12886671	0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12887997	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12892653	0.90[AFR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12895508	0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1469253	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17765643	0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1812858	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1834426	0.89[EUR][1000 genomes]
rs2182972	0.82[AFR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2217022	0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2225195	0.89[EUR][1000 genomes]
rs2332274	0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs34199159	0.91[EUR][1000 genomes]
rs34204434	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs34368785	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs35059733	0.85[EUR][1000 genomes]
rs35854868	0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35858046	0.90[AFR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs56811288	0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs61978252	0.90[EUR][1000 genomes]
rs7142965	0.87[EUR][1000 genomes]
rs7350719	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs8013825	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs8017936	0.90[EUR][1000 genomes]
rs8018340	0.91[EUR][1000 genomes]
rs9323533	0.90[AFR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832826	chr14:70559589-70723464	Bivalent/Poised TSS Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv902075	chr14:70612618-70919016	Enhancers Strong transcription Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
3	nsv565008	chr14:70681037-70689272	Enhancers Weak transcription	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
4	nsv565009	chr14:70681037-70689390	Weak transcription Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70656400-70688400	Weak transcription	Psoas Muscle	Psoas

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