Variant report

Variant rs35762933
Chromosome Location chr1:222887907-222887908
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:222883800-222888000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
2 chr1:222883800-222888000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
3 chr1:222884200-222888000 Active TSS Rectal Mucosa Donor 29 rectum
4 chr1:222884400-222888000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr1:222887000-222888000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr1:222887000-222888000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
7 chr1:222887200-222888000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
8 chr1:222887200-222888000 Weak transcription Gastric stomach
9 chr1:222887200-222888000 Weak transcription Small Intestine intestine
10 chr1:222887200-222888600 Flanking Active TSS Dnd41 blood
11 chr1:222887200-222889600 Weak transcription Lung lung
12 chr1:222887200-222899000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr1:222887200-222899000 Weak transcription Esophagus oesophagus
14 chr1:222887200-222909600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:222887400-222888000 Enhancers Primary mononuclear cells fromperipheralblood Blood
16 chr1:222887400-222888000 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr1:222887400-222888000 Enhancers Skeletal Muscle Male skeletal muscle
18 chr1:222887400-222888200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
19 chr1:222887400-222888400 Enhancers Primary B cells from peripheral blood blood
20 chr1:222887400-222888600 Enhancers Primary T helper cells fromperipheralblood blood
21 chr1:222887400-222889600 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr1:222887400-222889600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr1:222887400-222889600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr1:222887400-222889600 Weak transcription Fetal Muscle Leg muscle
25 chr1:222887400-222889800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr1:222887400-222889800 Weak transcription Rectal Smooth Muscle rectum
27 chr1:222887400-222892200 Weak transcription HSMMtube muscle
28 chr1:222887400-222892600 Weak transcription Brain Substantia Nigra brain
29 chr1:222887400-222893000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr1:222887400-222893000 Weak transcription Placenta Amnion Placenta Amnion
31 chr1:222887400-222895200 Weak transcription Psoas Muscle Psoas
32 chr1:222887400-222902200 Weak transcription Fetal Heart heart
33 chr1:222887400-222903600 Weak transcription Aorta Aorta
34 chr1:222887400-222904400 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr1:222887400-222908800 Weak transcription Stomach Mucosa stomach
36 chr1:222887400-222909600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
37 chr1:222887400-222912000 Weak transcription ES-WA7 Cell Line embryonic stem cell
38 chr1:222887600-222888000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr1:222887600-222888000 Enhancers Primary hematopoietic stem cells blood
40 chr1:222887600-222888000 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr1:222887600-222888000 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr1:222887600-222888000 Enhancers Fetal Adrenal Gland Adrenal Gland
43 chr1:222887600-222888000 Weak transcription Fetal Intestine Small intestine
44 chr1:222887600-222888000 Enhancers Fetal Muscle Trunk muscle
45 chr1:222887600-222888000 Enhancers HUVEC blood vessel
46 chr1:222887600-222888200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
47 chr1:222887600-222888200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr1:222887600-222888200 Enhancers Primary monocytes fromperipheralblood blood
49 chr1:222887600-222888200 Enhancers Primary hematopoietic stem cells short term culture blood
50 chr1:222887600-222888200 Enhancers Primary T helper cells PMA-I stimulated --

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