Variant report

Variant	rs357679
Chromosome Location	chr13:49510152-49510153
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs12876671	0.95[EUR][1000 genomes]
rs17464210	0.96[EUR][1000 genomes]
rs1964160	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs33945289	0.92[EUR][1000 genomes]
rs34494225	0.94[EUR][1000 genomes]
rs357684	0.94[EUR][1000 genomes]
rs6561486	0.94[EUR][1000 genomes]
rs6561489	0.93[EUR][1000 genomes]
rs7330857	0.94[EUR][1000 genomes]
rs7338291	0.93[EUR][1000 genomes]
rs7985609	0.94[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049117	chr13:49089476-49928945	Enhancers Strong transcription Weak transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:49509800-49510600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr13:49510000-49510200	Enhancers	Placenta	Placenta

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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