The 2.0 version of rSNPBase

Variant report

Variant rs35775533
Chromosome Location chr1:220307676-220307677
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220268400-220330200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:220269400-220330000 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr1:220278600-220316200 Weak transcription Pancreas Pancrea
4 chr1:220281400-220307800 Weak transcription Psoas Muscle Psoas
5 chr1:220281400-220314400 Weak transcription Fetal Brain Male brain
6 chr1:220284600-220307800 Weak transcription Spleen Spleen
7 chr1:220284600-220313000 Weak transcription H9 Cell Line embryonic stem cell
8 chr1:220284600-220313600 Weak transcription Gastric stomach
9 chr1:220284600-220324600 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr1:220288200-220324600 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr1:220288400-220310200 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr1:220289600-220307800 Weak transcription Thymus Thymus
13 chr1:220289800-220307800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr1:220290400-220307800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr1:220290800-220307800 Weak transcription Lung lung
16 chr1:220291200-220314400 Weak transcription NH-A brain
17 chr1:220295200-220309000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr1:220295400-220310600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr1:220296000-220327600 Weak transcription Colonic Mucosa Colon
20 chr1:220296600-220323200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr1:220298200-220307800 Weak transcription Colon Smooth Muscle Colon
22 chr1:220298600-220321600 Strong transcription Fetal Adrenal Gland Adrenal Gland
23 chr1:220298800-220309000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr1:220298800-220310400 Strong transcription Primary T helper cells fromperipheralblood blood
25 chr1:220298800-220311600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr1:220298800-220334600 Strong transcription Fetal Thymus thymus
27 chr1:220299000-220309000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr1:220299000-220321200 Strong transcription Breast Myoepithelial Primary Cells Breast
29 chr1:220299000-220322800 Weak transcription Stomach Mucosa stomach
30 chr1:220300000-220310000 Strong transcription Primary hematopoietic stem cells short term culture blood
31 chr1:220300000-220321000 Strong transcription Fetal Intestine Large intestine
32 chr1:220300000-220321600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr1:220301000-220307800 Weak transcription Placenta Amnion Placenta Amnion
34 chr1:220301000-220310200 Weak transcription HUVEC blood vessel
35 chr1:220301000-220314600 Weak transcription Right Ventricle heart
36 chr1:220301200-220310600 Weak transcription Hela-S3 cervix
37 chr1:220301400-220312600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr1:220302000-220307800 Weak transcription Brain Hippocampus Middle brain
39 chr1:220302000-220309800 Weak transcription Esophagus oesophagus
40 chr1:220302000-220313000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr1:220302400-220307800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr1:220302400-220312600 Weak transcription Brain Inferior Temporal Lobe brain
43 chr1:220303000-220307800 Weak transcription Brain Substantia Nigra brain
44 chr1:220303200-220310600 Weak transcription Brain Germinal Matrix brain
45 chr1:220303200-220312200 Weak transcription Primary T killer naive cells fromperipheralblood blood
46 chr1:220303200-220314600 Weak transcription NHLF lung
47 chr1:220303600-220310200 Weak transcription A549 lung
48 chr1:220303800-220310400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr1:220303800-220331600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
50 chr1:220304600-220316400 Strong transcription Fetal Stomach stomach

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Last update: Aug 31, 2015