Variant report

Variant rs35848246
Chromosome Location chr9:139873962-139873963
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:139872400-139874000 Active TSS HSMM muscle
2 chr9:139872600-139875800 Weak transcription Fetal Heart heart
3 chr9:139872600-139877600 Enhancers Spleen Spleen
4 chr9:139872800-139874200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr9:139872800-139874200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr9:139872800-139874200 Enhancers Primary Natural Killer cells fromperipheralblood blood
7 chr9:139872800-139874400 Bivalent Enhancer Primary T cells fromperipheralblood blood
8 chr9:139872800-139875000 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin01 Skin
9 chr9:139872800-139875000 Weak transcription Adipose Nuclei Adipose
10 chr9:139872800-139875600 Weak transcription Muscle Satellite Cultured Cells --
11 chr9:139872800-139875600 Weak transcription Fetal Lung lung
12 chr9:139872800-139875800 Weak transcription HUVEC blood vessel
13 chr9:139873000-139875400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr9:139873000-139875600 Enhancers Right Ventricle heart
15 chr9:139873000-139876600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr9:139873200-139874000 Enhancers Hela-S3 cervix
17 chr9:139873200-139877600 Enhancers Left Ventricle heart
18 chr9:139873400-139874000 Flanking Active TSS Brain Substantia Nigra brain
19 chr9:139873400-139874200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
20 chr9:139873400-139874400 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
21 chr9:139873400-139874600 Transcr. at gene 5' and 3' Brain Hippocampus Middle brain
22 chr9:139873400-139877600 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
23 chr9:139873600-139874000 Enhancers HUES48 Cell Line embryonic stem cell
24 chr9:139873600-139874000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
25 chr9:139873600-139874000 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
26 chr9:139873600-139874000 Bivalent Enhancer Placenta Placenta
27 chr9:139873600-139874200 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr9:139873600-139874200 Enhancers HepG2 liver
29 chr9:139873600-139874400 Transcr. at gene 5' and 3' Brain Cingulate Gyrus brain
30 chr9:139873600-139874800 Weak transcription Lung lung
31 chr9:139873600-139875800 Weak transcription Placenta Amnion Placenta Amnion
32 chr9:139873600-139886200 Weak transcription Pancreas Pancrea
33 chr9:139873800-139874200 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
34 chr9:139873800-139874200 Active TSS Brain Angular Gyrus brain
35 chr9:139873800-139874200 Active TSS Brain Anterior Caudate brain
36 chr9:139873800-139874200 Flanking Active TSS Brain Inferior Temporal Lobe brain
37 chr9:139873800-139874800 Weak transcription Right Atrium heart
38 chr9:139873800-139875200 Enhancers K562 blood
39 chr9:139873800-139876400 Weak transcription A549 lung
40 chr9:139873800-139877200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr9:139873800-139879600 Weak transcription H9 Cell Line embryonic stem cell

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