Variant report

Variant	rs35927619
Chromosome Location	chr2:213457361-213457362
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11688976	0.83[ASN][1000 genomes]
rs1878566	1.00[ASN][1000 genomes]
rs4673669	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6731808	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6761880	0.80[EUR][1000 genomes]
rs7578094	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7583787	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7598633	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9288455	0.80[EUR][1000 genomes];0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948878	chr2:213345197-213534298	Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:213457200-213458000	Enhancers	NHEK	skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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