The 2.0 version of rSNPBase

Variant report

Variant rs35940089
Chromosome Location chr2:209103013-209103014
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:209087600-209103400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr2:209090000-209104400 Weak transcription NHEK skin
3 chr2:209093000-209118400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr2:209096200-209104400 Weak transcription HSMM muscle
5 chr2:209097400-209104600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr2:209097800-209103800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr2:209097800-209104400 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr2:209098200-209103400 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr2:209098400-209103200 Weak transcription Rectal Smooth Muscle rectum
10 chr2:209098400-209103400 Weak transcription GM12878-XiMat blood
11 chr2:209098400-209104400 Weak transcription Pancreas Pancrea
12 chr2:209098800-209103200 Weak transcription NH-A brain
13 chr2:209098800-209109400 Weak transcription Muscle Satellite Cultured Cells --
14 chr2:209098800-209112200 Weak transcription Colonic Mucosa Colon
15 chr2:209099000-209103400 Weak transcription Thymus Thymus
16 chr2:209099000-209104600 Weak transcription Small Intestine intestine
17 chr2:209099000-209106400 Weak transcription Psoas Muscle Psoas
18 chr2:209099400-209110400 Weak transcription NHLF lung
19 chr2:209099600-209103200 Weak transcription K562 blood
20 chr2:209099600-209103400 Weak transcription Spleen Spleen
21 chr2:209099600-209113000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr2:209099600-209114600 Strong transcription Monocytes-CD14+_RO01746 blood
23 chr2:209099800-209103400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr2:209099800-209110000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr2:209099800-209113600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr2:209099800-209115000 Strong transcription Fetal Brain Female brain
27 chr2:209099800-209117000 Strong transcription Skeletal Muscle Male skeletal muscle
28 chr2:209099800-209117200 Strong transcription Primary T cells fromperipheralblood blood
29 chr2:209099800-209118000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
30 chr2:209100000-209103400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr2:209100000-209105600 Strong transcription Rectal Mucosa Donor 31 rectum
32 chr2:209100000-209107400 Strong transcription Brain Germinal Matrix brain
33 chr2:209100000-209110600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr2:209100000-209112400 Strong transcription Cortex derived primary cultured neurospheres brain
35 chr2:209100000-209113400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr2:209100000-209113600 Strong transcription Primary neutrophils fromperipheralblood blood
37 chr2:209100000-209115000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr2:209100000-209115000 Strong transcription A549 lung
39 chr2:209100000-209117000 Strong transcription HUES6 Cell Line embryonic stem cell
40 chr2:209100000-209117000 Strong transcription Left Ventricle heart
41 chr2:209100200-209103400 Weak transcription Aorta Aorta
42 chr2:209100200-209103400 Weak transcription NHDF-Ad bronchial
43 chr2:209100200-209106200 Strong transcription Rectal Mucosa Donor 29 rectum
44 chr2:209100200-209109600 Strong transcription Fetal Adrenal Gland Adrenal Gland
45 chr2:209100200-209113400 Weak transcription Primary T killer memory cells from peripheral blood blood
46 chr2:209100200-209114000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr2:209100200-209114400 Strong transcription Primary hematopoietic stem cells short term culture blood
48 chr2:209100200-209114600 Strong transcription HUES64 Cell Line embryonic stem cell
49 chr2:209100200-209114600 Strong transcription iPS-20b Cell Line embryonic stem cell
50 chr2:209100200-209114600 Strong transcription Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015