The 2.0 version of rSNPBase

Variant report

Variant rs35940251
Chromosome Location chr15:40524891-40524892
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:40453800-40525000 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr15:40455400-40530400 Weak transcription Fetal Brain Female brain
3 chr15:40455600-40530400 Weak transcription Brain Germinal Matrix brain
4 chr15:40473600-40525200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr15:40475000-40526400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr15:40483000-40526200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr15:40485400-40527600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr15:40491000-40526600 Weak transcription Primary B cells from cord blood blood
9 chr15:40491200-40527200 Strong transcription Fetal Thymus thymus
10 chr15:40492800-40530800 Weak transcription Duodenum Mucosa Duodenum
11 chr15:40493400-40527000 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr15:40503400-40526600 Weak transcription Muscle Satellite Cultured Cells --
13 chr15:40504400-40526400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr15:40513200-40531200 Weak transcription NHDF-Ad bronchial
15 chr15:40513400-40530800 Weak transcription A549 lung
16 chr15:40513600-40526200 Weak transcription HSMM muscle
17 chr15:40514200-40526800 Weak transcription Hela-S3 cervix
18 chr15:40515400-40530600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr15:40516200-40530600 Weak transcription Fetal Intestine Large intestine
20 chr15:40516600-40525000 Weak transcription NH-A brain
21 chr15:40517200-40530200 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr15:40518200-40528600 Weak transcription HUVEC blood vessel
23 chr15:40519400-40529000 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr15:40519600-40526600 Strong transcription Thymus Thymus
25 chr15:40519800-40525400 Strong transcription HUES6 Cell Line embryonic stem cell
26 chr15:40521000-40526200 Enhancers NHEK skin
27 chr15:40522200-40526800 Weak transcription iPS-15b Cell Line embryonic stem cell
28 chr15:40522200-40526800 Weak transcription Primary hematopoietic stem cells blood
29 chr15:40522200-40527000 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr15:40522200-40528800 Weak transcription NHLF lung
31 chr15:40522200-40530000 Weak transcription H1 Cell Line embryonic stem cell
32 chr15:40522400-40526000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr15:40522400-40528600 Weak transcription iPS-18 Cell Line embryonic stem cell
34 chr15:40522400-40528800 Weak transcription H9 Cell Line embryonic stem cell
35 chr15:40522400-40530400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr15:40522400-40530400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
37 chr15:40522400-40531800 Weak transcription Gastric stomach
38 chr15:40522600-40525800 Weak transcription Dnd41 blood
39 chr15:40523400-40525200 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
40 chr15:40523400-40526400 Weak transcription ES-I3 Cell Line embryonic stem cell
41 chr15:40523600-40525000 Weak transcription Primary neutrophils fromperipheralblood blood
42 chr15:40523600-40526200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr15:40523600-40527000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr15:40523600-40530400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr15:40523800-40526600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr15:40523800-40528600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr15:40524000-40529200 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr15:40524200-40525400 Enhancers Cortex derived primary cultured neurospheres brain
49 chr15:40524200-40525400 Enhancers Esophagus oesophagus
50 chr15:40524200-40526000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015