Variant report

Variant	rs35951757
Chromosome Location	chr11:74994827-74994828
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:74983331..74988727-chr11:74991220..74996395,5	K562	blood:

Variant related genes	Relation type
ENSG00000137486	Chromatin interaction

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs72992687	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049887	chr11:74937977-75040438	Strong transcription Weak transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Active TSS Enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv1036292	chr11:74937977-75059496	Weak transcription Genic enhancers Strong transcription Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	65 gene(s)	inside rSNPs	diseases
3	nsv1041640	chr11:74945824-75174688	Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS Genic enhancers Strong transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	94 gene(s)	inside rSNPs	diseases
4	nsv832211	chr11:74945839-75106125	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	66 gene(s)	inside rSNPs	diseases
5	nsv522447	chr11:74982939-75068767	Genic enhancers Enhancers Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA	57 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:100 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:74972400-75004400	Weak transcription	Fetal Brain Male	brain
2	chr11:74975600-74999000	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr11:74978600-74995000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr11:74983600-74996000	Weak transcription	Aorta	Aorta
5	chr11:74983800-74996400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
6	chr11:74985400-74995600	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr11:74987200-74998800	Strong transcription	Fetal Brain Female	brain
8	chr11:74987200-74999400	Weak transcription	Fetal Kidney	kidney
9	chr11:74987800-74998800	Strong transcription	Colonic Mucosa	Colon
10	chr11:74988200-75002000	Weak transcription	Thymus	Thymus
11	chr11:74988200-75008600	Strong transcription	Monocytes-CD14+_RO01746	blood
12	chr11:74988200-75012400	Weak transcription	Small Intestine	intestine
13	chr11:74988400-75005400	Strong transcription	Primary monocytes fromperipheralblood	blood
14	chr11:74988600-75001000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
15	chr11:74988800-75004200	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
16	chr11:74989000-75000200	Weak transcription	K562	blood
17	chr11:74989200-74995400	Strong transcription	Primary hematopoietic stem cells	blood
18	chr11:74990000-74995200	Weak transcription	Left Ventricle	heart
19	chr11:74990000-75003800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
20	chr11:74991000-75001200	Strong transcription	Sigmoid Colon	Sigmoid Colon
21	chr11:74991400-74998800	Strong transcription	Primary neutrophils fromperipheralblood	blood
22	chr11:74991400-75004000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
23	chr11:74991600-74995000	Strong transcription	Brain Germinal Matrix	brain
24	chr11:74991600-74998600	Weak transcription	Fetal Thymus	thymus
25	chr11:74991600-75004200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
26	chr11:74991600-75007800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
27	chr11:74991800-74996800	Strong transcription	H9 Cell Line	embryonic stem cell
28	chr11:74991800-74996800	Strong transcription	Pancreas	Pancrea
29	chr11:74991800-74998000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
30	chr11:74991800-74998400	Strong transcription	Primary T helper cells PMA-I stimulated	--
31	chr11:74991800-74998600	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
32	chr11:74991800-74998600	Strong transcription	Primary T cells fromperipheralblood	blood
33	chr11:74991800-74998800	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
34	chr11:74991800-74998800	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
35	chr11:74991800-74999600	Weak transcription	HSMM	muscle
36	chr11:74991800-75000000	Weak transcription	NHDF-Ad	bronchial
37	chr11:74991800-75000400	Strong transcription	Primary T helper cells fromperipheralblood	blood
38	chr11:74991800-75001400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
39	chr11:74991800-75001400	Strong transcription	Placenta	Placenta
40	chr11:74991800-75004200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
41	chr11:74992000-74995200	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
42	chr11:74992000-74996200	Strong transcription	Brain Dorsolateral Prefrontal Cortex	brain
43	chr11:74992000-74998200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
44	chr11:74992000-74998200	Weak transcription	Fetal Heart	heart
45	chr11:74992000-74998600	Strong transcription	Rectal Smooth Muscle	rectum
46	chr11:74992000-74999200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
47	chr11:74992000-74999400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
48	chr11:74992000-74999800	Strong transcription	Duodenum Smooth Muscle	Duodenum
49	chr11:74992000-75003600	Strong transcription	Fetal Stomach	stomach
50	chr11:74992000-75004000	Weak transcription	Skeletal Muscle Female	skeletal muscle

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