Variant report

Variant	rs35957555
Chromosome Location	chr10:25589572-25589573
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs73608282	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2761583	chr10:25525657-25722444	Weak transcription Enhancers ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:25582000-25592000	Weak transcription	Cortex derived primary cultured neurospheres	brain
2	chr10:25588800-25589600	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr10:25588800-25589800	Enhancers	HUES6 Cell Line	embryonic stem cell
4	chr10:25589000-25589600	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr10:25589000-25589600	Enhancers	iPS-20b Cell Line	embryonic stem cell
6	chr10:25589000-25589600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
7	chr10:25589000-25589800	Enhancers	HUES64 Cell Line	embryonic stem cell
8	chr10:25589200-25589800	Enhancers	iPS-18 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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