Variant report

Variant rs35957960
Chromosome Location chr11:8708527-8708528
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:8704800-8709200 Transcr. at gene 5' and 3' K562 blood
2 chr11:8705400-8709800 Weak transcription Aorta Aorta
3 chr11:8705600-8709000 Transcr. at gene 5' and 3' GM12878-XiMat blood
4 chr11:8705800-8709200 Transcr. at gene 5' and 3' Hela-S3 cervix
5 chr11:8706000-8708600 Strong transcription H9 Cell Line embryonic stem cell
6 chr11:8706000-8708600 Strong transcription Left Ventricle heart
7 chr11:8706000-8708600 Strong transcription Spleen Spleen
8 chr11:8706000-8708800 Strong transcription Brain Inferior Temporal Lobe brain
9 chr11:8706000-8708800 Strong transcription Fetal Brain Female brain
10 chr11:8706000-8708800 Strong transcription Lung lung
11 chr11:8706000-8708800 Strong transcription Pancreas Pancrea
12 chr11:8706000-8709000 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr11:8706000-8709000 Strong transcription Fetal Stomach stomach
14 chr11:8706000-8709200 Strong transcription Fetal Muscle Trunk muscle
15 chr11:8706000-8709400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr11:8706000-8709600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr11:8706000-8709600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr11:8706000-8709600 Weak transcription Right Atrium heart
19 chr11:8706200-8708600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr11:8706200-8708600 Strong transcription Adipose Nuclei Adipose
21 chr11:8706200-8708600 Strong transcription Sigmoid Colon Sigmoid Colon
22 chr11:8706200-8708800 Strong transcription Primary monocytes fromperipheralblood blood
23 chr11:8706200-8708800 Strong transcription Brain Substantia Nigra brain
24 chr11:8706200-8708800 Strong transcription Fetal Thymus thymus
25 chr11:8706200-8708800 Strong transcription Stomach Smooth Muscle stomach
26 chr11:8706200-8709000 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr11:8706200-8709000 Strong transcription Brain Hippocampus Middle brain
28 chr11:8706200-8709000 Strong transcription Rectal Mucosa Donor 29 rectum
29 chr11:8706200-8709600 Strong transcription Brain Germinal Matrix brain
30 chr11:8706400-8708800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
31 chr11:8706400-8708800 Strong transcription Brain Anterior Caudate brain
32 chr11:8706400-8708800 Strong transcription Fetal Kidney kidney
33 chr11:8706400-8708800 Strong transcription Fetal Lung lung
34 chr11:8706400-8708800 Strong transcription Placenta Placenta
35 chr11:8706400-8709000 Strong transcription Primary hematopoietic stem cells blood
36 chr11:8706600-8708600 Strong transcription Colonic Mucosa Colon
37 chr11:8706600-8708600 Strong transcription Colon Smooth Muscle Colon
38 chr11:8706600-8708800 Genic enhancers HepG2 liver
39 chr11:8706600-8709000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr11:8706600-8709200 Strong transcription Primary T regulatory cells fromperipheralblood blood
41 chr11:8706800-8708600 Strong transcription Primary neutrophils fromperipheralblood blood
42 chr11:8706800-8708800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr11:8706800-8708800 Strong transcription Primary B cells from cord blood blood
44 chr11:8706800-8708800 Strong transcription Primary B cells from peripheral blood blood
45 chr11:8706800-8708800 Strong transcription Primary T cells from cord blood blood
46 chr11:8706800-8708800 Strong transcription Primary T helper cells fromperipheralblood blood
47 chr11:8706800-8708800 Strong transcription Brain Cingulate Gyrus brain
48 chr11:8706800-8709000 Strong transcription Brain Angular Gyrus brain
49 chr11:8706800-8709000 Weak transcription Fetal Heart heart
50 chr11:8706800-8709000 Strong transcription Fetal Intestine Large intestine

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