Variant report

Variant	rs35963574
Chromosome Location	chr1:217314861-217314862
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10495041	0.92[AMR][1000 genomes]
rs11576172	1.00[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs11576806	0.88[AMR][1000 genomes]
rs11579927	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11586921	1.00[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs12739810	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12749238	1.00[ASN][1000 genomes]
rs12751962	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs1502356	0.88[AMR][1000 genomes]
rs17695327	0.81[AMR][1000 genomes]
rs35478056	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35579427	1.00[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs35685026	0.92[AMR][1000 genomes]
rs35778506	0.92[AMR][1000 genomes]
rs71643444	1.00[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs71643445	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:217314000-217315200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr1:217314200-217318200	Weak transcription	Aorta	Aorta
3	chr1:217314400-217315200	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
4	chr1:217314400-217315200	Bivalent Enhancer	H9 Cell Line	embryonic stem cell
5	chr1:217314400-217315800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr1:217314400-217316000	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
7	chr1:217314600-217315200	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
8	chr1:217314600-217315400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr1:217314600-217315400	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
10	chr1:217314600-217315400	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
11	chr1:217314600-217315400	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
12	chr1:217314600-217316200	Enhancers	Fetal Heart	heart

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links