Variant report

Variant	rs35968103
Chromosome Location	chr2:10985803-10985804
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr2:10983477..10986559-chr2:11261395..11265674,4	MCF-7	breast:
2	chr2:10975730..10978665-chr2:10984710..10986250,2	K562	blood:
3	chr2:10984035..10986902-chr2:10994929..10997652,2	MCF-7	breast:
4	chr2:10975730..10978312-chr2:10984750..10987665,2	K562	blood:

Variant related genes	Relation type
ENSG00000143870	Chromatin interaction

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs34413173	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs34414864	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs59164865	0.88[AFR][1000 genomes]
rs62120316	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:10979400-11000400	Weak transcription	Fetal Brain Male	brain
2	chr2:10984200-10987000	Active TSS	Right Ventricle	heart
3	chr2:10984200-10987400	Enhancers	Fetal Heart	heart
4	chr2:10984400-10986000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
5	chr2:10984400-10986400	Active TSS	Left Ventricle	heart
6	chr2:10984400-10988000	Active TSS	Right Atrium	heart
7	chr2:10984400-10988600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr2:10984600-10986600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr2:10984600-10987000	Weak transcription	Lung	lung
10	chr2:10984800-10986000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr2:10984800-10986000	Weak transcription	HUES6 Cell Line	embryonic stem cell
12	chr2:10984800-10986000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
13	chr2:10984800-10987000	Enhancers	Fetal Muscle Leg	muscle
14	chr2:10984800-10988800	Weak transcription	Cortex derived primary cultured neurospheres	brain
15	chr2:10985400-10986400	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
16	chr2:10985400-10986800	Enhancers	Stomach Smooth Muscle	stomach
17	chr2:10985600-10986600	Enhancers	Psoas Muscle	Psoas
18	chr2:10985600-10986800	Enhancers	Colon Smooth Muscle	Colon
19	chr2:10985800-10986000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
20	chr2:10985800-10986000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
21	chr2:10985800-10986200	Enhancers	Esophagus	oesophagus
22	chr2:10985800-10986200	Bivalent Enhancer	Fetal Muscle Trunk	muscle
23	chr2:10985800-10986200	Enhancers	Gastric	stomach
24	chr2:10985800-10986200	Enhancers	Pancreas	Pancrea
25	chr2:10985800-10986400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
26	chr2:10985800-10986400	Enhancers	Skeletal Muscle Male	skeletal muscle
27	chr2:10985800-10987200	Weak transcription	Rectal Mucosa Donor 31	rectum
28	chr2:10985800-10988000	Enhancers	HepG2	liver

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