Variant report

Variant	rs35968460
Chromosome Location	chr11:119727199-119727200
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11607827	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12808728	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34071565	0.94[EUR][1000 genomes]
rs34699720	0.94[EUR][1000 genomes]
rs35163144	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35385093	0.89[EUR][1000 genomes]
rs35825681	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs71484150	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7925677	0.94[EUR][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:119722200-119729600	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr11:119724800-119727800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr11:119724800-119729600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr11:119725000-119727400	Enhancers	Right Ventricle	heart
5	chr11:119725600-119727800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr11:119725600-119728800	Weak transcription	Esophagus	oesophagus
7	chr11:119725800-119727800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr11:119725800-119728200	Weak transcription	Brain Hippocampus Middle	brain
9	chr11:119725800-119728600	Weak transcription	Fetal Intestine Large	intestine
10	chr11:119725800-119728800	Weak transcription	Fetal Intestine Small	intestine
11	chr11:119725800-119733200	Enhancers	Breast Myoepithelial Primary Cells	Breast
12	chr11:119726000-119729600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr11:119726400-119747000	Weak transcription	Right Atrium	heart
14	chr11:119726600-119727600	Weak transcription	Left Ventricle	heart

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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