The 2.0 version of rSNPBase

Variant report

Variant rs35976559
Chromosome Location chr5:14736494-14736495
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:14714200-14740800 Weak transcription Colon Smooth Muscle Colon
2 chr5:14715000-14744200 Weak transcription GM12878-XiMat blood
3 chr5:14715200-14737400 Weak transcription Spleen Spleen
4 chr5:14716000-14737000 Weak transcription Rectal Smooth Muscle rectum
5 chr5:14721400-14739000 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr5:14721400-14741400 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr5:14721600-14737800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr5:14721600-14738200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr5:14725200-14740200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr5:14725400-14758600 Weak transcription Primary hematopoietic stem cells blood
11 chr5:14725800-14745400 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr5:14726800-14739000 Weak transcription HMEC breast
13 chr5:14726800-14739600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr5:14726800-14739600 Weak transcription NHEK skin
15 chr5:14727000-14745600 Weak transcription Placenta Placenta
16 chr5:14727200-14742600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr5:14727200-14748000 Weak transcription Placenta Amnion Placenta Amnion
18 chr5:14727200-14757000 Weak transcription NHLF lung
19 chr5:14727800-14739600 Weak transcription NH-A brain
20 chr5:14728000-14736800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr5:14728000-14740600 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr5:14728000-14743600 Weak transcription HSMMtube muscle
23 chr5:14728000-14745000 Weak transcription Primary B cells from peripheral blood blood
24 chr5:14728200-14739400 Weak transcription Muscle Satellite Cultured Cells --
25 chr5:14728200-14739600 Weak transcription NHDF-Ad bronchial
26 chr5:14728400-14739400 Strong transcription Osteobl bone
27 chr5:14728800-14737200 Weak transcription Fetal Muscle Leg muscle
28 chr5:14728800-14738000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr5:14728800-14745600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
30 chr5:14729200-14737400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr5:14729200-14740200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr5:14729200-14740200 Weak transcription Esophagus oesophagus
33 chr5:14729200-14740200 Weak transcription Gastric stomach
34 chr5:14729200-14742200 Strong transcription Breast Myoepithelial Primary Cells Breast
35 chr5:14729200-14791000 Weak transcription Small Intestine intestine
36 chr5:14729400-14739400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr5:14729600-14738800 Strong transcription Sigmoid Colon Sigmoid Colon
38 chr5:14729600-14752600 Strong transcription Fetal Intestine Large intestine
39 chr5:14729800-14749400 Strong transcription Fetal Intestine Small intestine
40 chr5:14730000-14740200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr5:14730000-14758400 Strong transcription Rectal Mucosa Donor 29 rectum
42 chr5:14730200-14739800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr5:14730200-14740000 Weak transcription iPS-15b Cell Line embryonic stem cell
44 chr5:14730200-14740800 Weak transcription H9 Cell Line embryonic stem cell
45 chr5:14730400-14741800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
46 chr5:14730600-14738600 Enhancers Fetal Thymus thymus
47 chr5:14730800-14740200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr5:14731400-14737800 Weak transcription Ovary ovary
49 chr5:14731600-14740200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
50 chr5:14732000-14738600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015