Variant report

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv932521	chrX:32947000-33798879	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv432295	chrX:33158109-34158023	Active TSS Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	esv2752322	chrX:33605225-34358075	Enhancers Weak transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	esv3392604	chrX:33644563-33845254	Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:33741600-33746000	Active TSS	Pancreatic Islets	Pancreatic Islet
2	chrX:33743200-33744000	Active TSS	Fetal Stomach	stomach
3	chrX:33743400-33743600	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
4	chrX:33743400-33744000	Active TSS	Fetal Muscle Leg	muscle
5	chrX:33743400-33744000	Active TSS	Stomach Smooth Muscle	stomach
6	chrX:33743400-33744200	Active TSS	HMEC	breast
7	chrX:33743400-33744400	Active TSS	ES-I3 Cell Line	embryonic stem cell
8	chrX:33743400-33744400	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chrX:33743400-33744400	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chrX:33743400-33744400	Active TSS	Brain Inferior Temporal Lobe	brain
11	chrX:33743400-33744400	Active TSS	Fetal Adrenal Gland	Adrenal Gland
12	chrX:33743400-33744400	Active TSS	HUVEC	blood vessel
13	chrX:33743400-33744800	Bivalent/Poised TSS	Breast Myoepithelial Primary Cells	Breast
14	chrX:33743400-33744800	Active TSS	Muscle Satellite Cultured Cells	--
15	chrX:33743400-33744800	Active TSS	Brain Hippocampus Middle	brain
16	chrX:33743400-33745200	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
17	chrX:33743400-33745200	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
18	chrX:33743400-33745200	Active TSS	Brain Angular Gyrus	brain
19	chrX:33743400-33745200	Bivalent/Poised TSS	Fetal Kidney	kidney
20	chrX:33743400-33745800	Active TSS	Duodenum Smooth Muscle	Duodenum
21	chrX:33743400-33746000	Active TSS	Aorta	Aorta

Quick Search: