The 2.0 version of rSNPBase

Variant report

Variant rs36044624
Chromosome Location chr19:44496479-44496480
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:44489200-44496600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr19:44489200-44500400 Weak transcription HUVEC blood vessel
3 chr19:44489200-44506200 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr19:44489200-44506200 Weak transcription Hela-S3 cervix
5 chr19:44489400-44496600 Weak transcription H9 Cell Line embryonic stem cell
6 chr19:44489600-44506200 Weak transcription HepG2 liver
7 chr19:44491000-44500200 Strong transcription Fetal Lung lung
8 chr19:44491000-44501600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
9 chr19:44491000-44503400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr19:44491000-44503800 ZNF genes & repeats Liver Liver
11 chr19:44491400-44503400 ZNF genes & repeats Primary hematopoietic stem cells blood
12 chr19:44491600-44500000 Strong transcription Primary T cells from cord blood blood
13 chr19:44491600-44501800 Strong transcription Brain Hippocampus Middle brain
14 chr19:44491800-44502200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr19:44492000-44502000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr19:44492200-44499600 Strong transcription Primary T killer naive cells fromperipheralblood blood
17 chr19:44492200-44500200 Strong transcription Rectal Mucosa Donor 29 rectum
18 chr19:44492200-44500400 Strong transcription Primary T helper cells fromperipheralblood blood
19 chr19:44492200-44501400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr19:44492400-44497400 Strong transcription Rectal Smooth Muscle rectum
21 chr19:44492400-44499200 Strong transcription Brain Inferior Temporal Lobe brain
22 chr19:44492400-44501000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr19:44492400-44501400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr19:44492400-44501400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
25 chr19:44492400-44501800 Strong transcription Primary T cells fromperipheralblood blood
26 chr19:44492400-44501800 Strong transcription Brain Cingulate Gyrus brain
27 chr19:44492400-44502000 Strong transcription Fetal Adrenal Gland Adrenal Gland
28 chr19:44492400-44502200 Strong transcription Fetal Intestine Large intestine
29 chr19:44492400-44502200 Strong transcription HSMM muscle
30 chr19:44492400-44502400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr19:44492400-44502400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr19:44492400-44502600 Strong transcription Fetal Muscle Trunk muscle
33 chr19:44492600-44496800 Strong transcription Brain Germinal Matrix brain
34 chr19:44492600-44497400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr19:44492600-44498600 Strong transcription Primary T regulatory cells fromperipheralblood blood
36 chr19:44492600-44499600 Strong transcription Left Ventricle heart
37 chr19:44492600-44500200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr19:44492600-44500200 Strong transcription Primary B cells from peripheral blood blood
39 chr19:44492600-44500200 Strong transcription Fetal Muscle Leg muscle
40 chr19:44492600-44500400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr19:44492600-44501200 Strong transcription iPS-18 Cell Line embryonic stem cell
42 chr19:44492600-44501600 Strong transcription Thymus Thymus
43 chr19:44492600-44502000 Strong transcription Skeletal Muscle Male skeletal muscle
44 chr19:44492600-44502200 Strong transcription Dnd41 blood
45 chr19:44492600-44502400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr19:44492600-44502400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr19:44492600-44502600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr19:44492800-44499200 Strong transcription Primary monocytes fromperipheralblood blood
49 chr19:44492800-44499200 Strong transcription Fetal Brain Female brain
50 chr19:44492800-44500200 Strong transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015