Variant report

Variant	rs36047337
Chromosome Location	chr22:32124374-32124375
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr22:32120656..32124590-chr22:32143018..32145052,3	K562	blood:
2	chr22:32082408..32084266-chr22:32123563..32125534,2	K562	blood:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs13057856	1.00[AFR][1000 genomes]
rs34103525	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34399834	0.88[AMR][1000 genomes]
rs34573564	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs34914089	1.00[AFR][1000 genomes]
rs62240517	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs62240580	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1060929	chr22:32102701-32176860	Flanking Active TSS Strong transcription Active TSS Weak transcription Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:32078800-32126000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr22:32081200-32126400	Weak transcription	Stomach Mucosa	stomach
3	chr22:32089400-32126000	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
4	chr22:32103000-32125000	Strong transcription	Monocytes-CD14+_RO01746	blood
5	chr22:32105800-32124600	Strong transcription	HUES48 Cell Line	embryonic stem cell
6	chr22:32105800-32125000	Strong transcription	Primary monocytes fromperipheralblood	blood
7	chr22:32109600-32128200	Weak transcription	Pancreas	Pancrea
8	chr22:32112200-32142000	Weak transcription	Hela-S3	cervix
9	chr22:32112200-32145000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
10	chr22:32113200-32132600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr22:32113400-32130400	Weak transcription	NH-A	brain
12	chr22:32113400-32143800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
13	chr22:32113600-32134800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
14	chr22:32113600-32142000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
15	chr22:32113800-32126200	Strong transcription	Fetal Intestine Small	intestine
16	chr22:32114600-32125200	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
17	chr22:32114600-32125200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
18	chr22:32114600-32129400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr22:32114800-32127200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
20	chr22:32114800-32127400	Strong transcription	Fetal Stomach	stomach
21	chr22:32115600-32126800	Strong transcription	HUES6 Cell Line	embryonic stem cell
22	chr22:32116000-32128400	Weak transcription	Small Intestine	intestine
23	chr22:32120000-32128200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
24	chr22:32120000-32130200	Weak transcription	HMEC	breast
25	chr22:32120000-32132400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
26	chr22:32120600-32134200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
27	chr22:32120800-32134400	Weak transcription	Colonic Mucosa	Colon
28	chr22:32121000-32124400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr22:32121000-32134000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
30	chr22:32121000-32144000	Weak transcription	Fetal Kidney	kidney
31	chr22:32121200-32124800	Weak transcription	Brain Cingulate Gyrus	brain
32	chr22:32121200-32128400	Weak transcription	NHEK	skin
33	chr22:32121200-32130400	Weak transcription	NHDF-Ad	bronchial
34	chr22:32121200-32143600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
35	chr22:32121200-32143600	Weak transcription	Colon Smooth Muscle	Colon
36	chr22:32121400-32124800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
37	chr22:32121400-32124800	Weak transcription	K562	blood
38	chr22:32121400-32128000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
39	chr22:32121400-32128000	Weak transcription	Rectal Mucosa Donor 31	rectum
40	chr22:32121400-32128200	Weak transcription	Gastric	stomach
41	chr22:32121400-32128200	Weak transcription	Osteobl	bone
42	chr22:32121400-32129200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
43	chr22:32121400-32130400	Weak transcription	Duodenum Smooth Muscle	Duodenum
44	chr22:32121400-32130400	Weak transcription	Thymus	Thymus
45	chr22:32121400-32130400	Weak transcription	NHLF	lung
46	chr22:32121400-32130600	Weak transcription	Aorta	Aorta
47	chr22:32121400-32132400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
48	chr22:32121400-32132400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
49	chr22:32121400-32133400	Weak transcription	Primary T helper cells PMA-I stimulated	--
50	chr22:32121400-32134200	Weak transcription	HUVEC	blood vessel

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