Variant report

Variant rs36080459
Chromosome Location chr21:46779778-46779779
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46767600-46781000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr21:46770200-46784200 Weak transcription Placenta Amnion Placenta Amnion
3 chr21:46770800-46785400 Weak transcription H9 Cell Line embryonic stem cell
4 chr21:46774000-46780200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr21:46774000-46783800 Weak transcription Esophagus oesophagus
6 chr21:46774800-46782400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr21:46775200-46787800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr21:46775600-46783200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr21:46775800-46780000 Enhancers Left Ventricle heart
10 chr21:46776000-46780400 Bivalent Enhancer Placenta Placenta
11 chr21:46776000-46780800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr21:46776200-46782400 Bivalent Enhancer Fetal Muscle Trunk muscle
13 chr21:46776600-46781200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr21:46776600-46783000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
15 chr21:46776600-46783200 Weak transcription Lung lung
16 chr21:46776800-46780600 Bivalent Enhancer Fetal Stomach stomach
17 chr21:46776800-46782800 Enhancers K562 blood
18 chr21:46777200-46782400 Enhancers HepG2 liver
19 chr21:46777200-46788600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr21:46777400-46781400 Enhancers H1 Cell Line embryonic stem cell
21 chr21:46777400-46783800 Weak transcription Fetal Thymus thymus
22 chr21:46777800-46781200 Weak transcription Muscle Satellite Cultured Cells --
23 chr21:46777800-46781400 Enhancers Fetal Heart heart
24 chr21:46777800-46782800 Weak transcription Pancreas Pancrea
25 chr21:46778000-46781000 Weak transcription Fetal Intestine Small intestine
26 chr21:46778000-46781200 Weak transcription Fetal Lung lung
27 chr21:46778000-46782800 Weak transcription HUVEC blood vessel
28 chr21:46778000-46787600 Enhancers Right Ventricle heart
29 chr21:46778200-46779800 Enhancers Fetal Muscle Leg muscle
30 chr21:46778200-46783800 Weak transcription Fetal Intestine Large intestine
31 chr21:46778600-46780400 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
32 chr21:46778600-46780800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr21:46778600-46781600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
34 chr21:46778600-46789200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr21:46778800-46783400 Weak transcription Ovary ovary
36 chr21:46778800-46783400 Weak transcription Right Atrium heart
37 chr21:46779000-46781400 Weak transcription ES-WA7 Cell Line embryonic stem cell
38 chr21:46779200-46779800 Enhancers A549 lung
39 chr21:46779200-46780200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr21:46779200-46780200 Enhancers HUES6 Cell Line embryonic stem cell
41 chr21:46779200-46780400 Enhancers ES-I3 Cell Line embryonic stem cell
42 chr21:46779200-46780400 Enhancers HUES64 Cell Line embryonic stem cell
43 chr21:46779200-46781000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
44 chr21:46779200-46782400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr21:46779400-46780600 Enhancers iPS-18 Cell Line embryonic stem cell
46 chr21:46779400-46780600 Enhancers Brain Cingulate Gyrus brain
47 chr21:46779400-46781400 Weak transcription Adipose Nuclei Adipose
48 chr21:46779600-46779800 Enhancers iPS-15b Cell Line embryonic stem cell
49 chr21:46779600-46779800 Enhancers iPS-20b Cell Line embryonic stem cell
50 chr21:46779600-46780000 Flanking Active TSS Brain Inferior Temporal Lobe brain

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