Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10941595	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10941597	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11743123	0.83[EUR][1000 genomes]
rs11743246	0.80[ASN][1000 genomes]
rs11747015	0.80[AMR][1000 genomes]
rs11949444	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11951144	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11954543	0.80[ASN][1000 genomes]
rs11958520	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12153132	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12187928	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13156722	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13185118	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2603626	0.81[EUR][1000 genomes]
rs2603628	0.83[EUR][1000 genomes]
rs2603629	0.84[EUR][1000 genomes]
rs309911	0.83[EUR][1000 genomes]
rs309939	0.83[EUR][1000 genomes]
rs309940	0.83[EUR][1000 genomes]
rs34009007	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3849698	0.80[ASN][1000 genomes]
rs62372095	0.82[EUR][1000 genomes]
rs6895732	0.83[EUR][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs36171678	ZNF131	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:47121600-47140200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr11:47122400-47140400	Weak transcription	Pancreas	Pancrea
3	chr11:47124600-47159000	Weak transcription	Primary T cells from cord blood	blood
4	chr11:47128600-47140600	Weak transcription	NHEK	skin
5	chr11:47128800-47143400	Weak transcription	Gastric	stomach
6	chr11:47129400-47158000	Weak transcription	Aorta	Aorta
7	chr11:47129400-47158600	Weak transcription	Spleen	Spleen
8	chr11:47130000-47159000	Weak transcription	Hela-S3	cervix
9	chr11:47131000-47140400	Weak transcription	Stomach Smooth Muscle	stomach
10	chr11:47131400-47140400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
11	chr11:47131600-47150400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr11:47131600-47155000	Weak transcription	Right Atrium	heart
13	chr11:47131600-47159400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
14	chr11:47131800-47150600	Weak transcription	Fetal Stomach	stomach
15	chr11:47131800-47161200	Weak transcription	Brain Cingulate Gyrus	brain
16	chr11:47132400-47144800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr11:47132600-47155600	Weak transcription	Cortex derived primary cultured neurospheres	brain
18	chr11:47133200-47140400	Weak transcription	Brain Inferior Temporal Lobe	brain

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