Variant report

Variant	rs363333
Chromosome Location	chr10:119004095-119004096
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs12414934	0.86[EUR][1000 genomes]
rs2803818	0.86[EUR][1000 genomes]
rs363317	0.82[EUR][1000 genomes]
rs363323	0.91[TSI][hapmap];0.86[EUR][1000 genomes]
rs363329	0.86[EUR][1000 genomes]
rs363330	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs363336	0.82[TSI][hapmap]
rs363365	0.82[EUR][1000 genomes]
rs363366	0.82[EUR][1000 genomes]
rs363387	0.84[MEX][hapmap];0.82[TSI][hapmap]
rs363400	0.82[TSI][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832002	chr10:118797070-119005840	Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	24 gene(s)	inside rSNPs	diseases
2	esv1812234	chr10:118977123-119004095	Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:119001600-119010200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr10:119001600-119013400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr10:119001800-119008000	Weak transcription	Primary hematopoietic stem cells	blood
4	chr10:119001800-119011800	Weak transcription	Ovary	ovary
5	chr10:119002200-119008200	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr10:119003400-119004800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr10:119003600-119004400	Genic enhancers	Primary T cells from cord blood	blood
8	chr10:119004000-119004200	Bivalent Enhancer	Primary neutrophils fromperipheralblood	blood
9	chr10:119004000-119004400	Genic enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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