Variant report

Variant	rs367867166
Chromosome Location	chr1:151693704-151693705
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MXI1	chr1:151692377-151694954	SK-N-SH	brain:	n/a	n/a
2	MXI1	chr1:151692896-151693897	IMR90	lung:	n/a	n/a
3	NR3C1	chr1:151693390-151693768	A549	lung:	n/a	chr1:151693501-151693518

No.	Distal block	Cell Line	Cell type
1	chr1:151693523..151696845-chr1:151699758..151701957,3	MCF-7	breast:
2	chr1:151685651..151688876-chr1:151692359..151694505,3	MCF-7	breast:
3	chr1:151674905..151676971-chr1:151691184..151693969,2	MCF-7	breast:
4	chr1:151430404..151432335-chr1:151692913..151695013,2	MCF-7	breast:

Variant related genes	Relation type
CELF3	TF binding region
RIIAD1	TF binding region
ENSG00000143442	Chromatin interaction
ENSG00000159409	Chromatin interaction
ENSG00000178796	Chromatin interaction

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3437612	chr1:151693528-151694776	Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:116 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:151691000-151694200	Weak transcription	Spleen	Spleen
2	chr1:151692600-151694000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr1:151692600-151694600	Enhancers	Sigmoid Colon	Sigmoid Colon
4	chr1:151692600-151694600	Enhancers	Small Intestine	intestine
5	chr1:151692800-151693800	Flanking Active TSS	GM12878-XiMat	blood
6	chr1:151692800-151693800	Flanking Bivalent TSS/Enh	Monocytes-CD14+_RO01746	blood
7	chr1:151692800-151694000	Bivalent Enhancer	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr1:151692800-151694400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr1:151693000-151693800	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr1:151693000-151693800	Flanking Bivalent TSS/Enh	Primary monocytes fromperipheralblood	blood
11	chr1:151693000-151693800	Flanking Active TSS	Primary B cells from peripheral blood	blood
12	chr1:151693000-151693800	Flanking Active TSS	Primary hematopoietic stem cells	blood
13	chr1:151693000-151693800	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells short term culture	blood
14	chr1:151693000-151693800	Flanking Active TSS	Liver	Liver
15	chr1:151693000-151693800	Flanking Active TSS	Brain Hippocampus Middle	brain
16	chr1:151693000-151693800	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
17	chr1:151693000-151693800	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
18	chr1:151693000-151693800	Flanking Active TSS	Duodenum Mucosa	Duodenum
19	chr1:151693000-151693800	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
20	chr1:151693000-151693800	Flanking Active TSS	Fetal Lung	lung
21	chr1:151693000-151693800	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
22	chr1:151693000-151693800	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
23	chr1:151693000-151693800	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
24	chr1:151693000-151693800	Active TSS	Hela-S3	cervix
25	chr1:151693000-151693800	Flanking Active TSS	Osteobl	bone
26	chr1:151693000-151694000	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
27	chr1:151693000-151694000	Enhancers	Brain Germinal Matrix	brain
28	chr1:151693000-151694000	Enhancers	Placenta	Placenta
29	chr1:151693000-151694000	Active TSS	Right Ventricle	heart
30	chr1:151693000-151694200	Bivalent/Poised TSS	Foreskin Fibroblast Primary Cells skin02	Skin
31	chr1:151693000-151694200	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
32	chr1:151693000-151694200	Active TSS	Colonic Mucosa	Colon
33	chr1:151693000-151694200	Active TSS	Colon Smooth Muscle	Colon
34	chr1:151693000-151694200	Active TSS	Lung	lung
35	chr1:151693000-151694200	Active TSS	Right Atrium	heart
36	chr1:151693000-151694200	Active TSS	NHLF	lung
37	chr1:151693000-151694400	Active TSS	Aorta	Aorta
38	chr1:151693000-151694400	Enhancers	Pancreas	Pancrea
39	chr1:151693000-151694600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
40	chr1:151693000-151694600	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
41	chr1:151693000-151694600	Active TSS	Pancreatic Islets	Pancreatic Islet
42	chr1:151693200-151693800	Flanking Bivalent TSS/Enh	iPS-15b Cell Line	embryonic stem cell
43	chr1:151693200-151693800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
44	chr1:151693200-151693800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr1:151693200-151693800	Flanking Bivalent TSS/Enh	Primary neutrophils fromperipheralblood	blood
46	chr1:151693200-151693800	Flanking Active TSS	Primary T cells fromperipheralblood	blood
47	chr1:151693200-151693800	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
48	chr1:151693200-151693800	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
49	chr1:151693200-151693800	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
50	chr1:151693200-151693800	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain

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