Variant report

Variant	rs368020692
Chromosome Location	chr7:96813637-96813638
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1019725	chr7:96749866-96850819	Weak transcription Flanking Active TSS ZNF genes & repeats Enhancers Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv539029	chr7:96749866-96850819	ZNF genes & repeats Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	esv2593872	chr7:96812488-96814172	Enhancers Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
4	esv2351360	chr7:96813017-96813722	Weak transcription Enhancers Strong transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:48 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:96771400-96818200	Weak transcription	A549	lung
2	chr7:96789400-96815400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
3	chr7:96789400-96818000	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr7:96789600-96818400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
5	chr7:96790400-96814600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr7:96797400-96814200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr7:96797400-96814800	Weak transcription	Pancreas	Pancrea
8	chr7:96797400-96816400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr7:96797400-96816600	Weak transcription	Aorta	Aorta
10	chr7:96797600-96818000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr7:96797800-96816000	Weak transcription	Primary B cells from cord blood	blood
12	chr7:96801200-96815400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr7:96803000-96818400	Weak transcription	Psoas Muscle	Psoas
14	chr7:96804000-96817200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
15	chr7:96804200-96816000	Weak transcription	Primary monocytes fromperipheralblood	blood
16	chr7:96804200-96816200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr7:96805000-96814200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
18	chr7:96805400-96819000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr7:96809400-96817400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
20	chr7:96810000-96818000	Weak transcription	Fetal Muscle Trunk	muscle
21	chr7:96810200-96815200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
22	chr7:96810600-96814000	Weak transcription	HSMMtube	muscle
23	chr7:96811000-96814200	Weak transcription	HUES48 Cell Line	embryonic stem cell
24	chr7:96812200-96814600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
25	chr7:96812200-96815600	Weak transcription	Primary T helper cells PMA-I stimulated	--
26	chr7:96812200-96815600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
27	chr7:96812400-96814000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
28	chr7:96812400-96814000	Weak transcription	HUES6 Cell Line	embryonic stem cell
29	chr7:96812400-96814000	Weak transcription	Fetal Intestine Large	intestine
30	chr7:96812400-96814000	Weak transcription	Left Ventricle	heart
31	chr7:96812400-96814200	Weak transcription	HepG2	liver
32	chr7:96812400-96814800	Weak transcription	Primary T cells fromperipheralblood	blood
33	chr7:96812400-96815600	Weak transcription	Primary T helper cells fromperipheralblood	blood
34	chr7:96812400-96816400	Weak transcription	Adipose Nuclei	Adipose
35	chr7:96812400-96817600	Weak transcription	Ovary	ovary
36	chr7:96812400-96818600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
37	chr7:96812400-96828800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
38	chr7:96812600-96814200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
39	chr7:96812600-96814200	Weak transcription	Dnd41	blood
40	chr7:96812600-96822200	Weak transcription	Liver	Liver
41	chr7:96812800-96814400	Enhancers	Monocytes-CD14+_RO01746	blood
42	chr7:96812800-96823000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr7:96813000-96814600	Weak transcription	HUES64 Cell Line	embryonic stem cell
44	chr7:96813000-96814600	Weak transcription	Duodenum Smooth Muscle	Duodenum
45	chr7:96813000-96817800	Weak transcription	GM12878-XiMat	blood
46	chr7:96813200-96816200	Weak transcription	K562	blood
47	chr7:96813200-96818600	Weak transcription	Primary T cells from cord blood	blood
48	chr7:96813600-96814000	Enhancers	Primary neutrophils fromperipheralblood	blood

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