Variant report

Variant	rs368124636
Chromosome Location	chr11:76534482-76534483
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:76531797..76536472-chr11:76570745..76574159,6	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-LRRC32-7	chr11:76534468-76534868	NONHSAT023194

Variant related genes	Relation type
ENSG00000078124	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv897931	chr11:76489673-76540708	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
2	esv3332513	chr11:76533354-76535352	Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76531800-76534600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr11:76533400-76534600	Enhancers	Monocytes-CD14+_RO01746	blood
3	chr11:76533600-76534600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr11:76533600-76534600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr11:76533600-76534600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr11:76533600-76534600	Enhancers	NH-A	brain
7	chr11:76533600-76534600	Enhancers	NHEK	skin
8	chr11:76533600-76537400	Enhancers	Breast Myoepithelial Primary Cells	Breast
9	chr11:76533600-76537400	Enhancers	HMEC	breast
10	chr11:76533800-76536000	Weak transcription	GM12878-XiMat	blood
11	chr11:76533800-76537000	Enhancers	NHDF-Ad	bronchial
12	chr11:76534000-76534600	Active TSS	K562	blood
13	chr11:76534200-76537400	Enhancers	Primary monocytes fromperipheralblood	blood
14	chr11:76534400-76534600	Enhancers	HUES6 Cell Line	embryonic stem cell
15	chr11:76534400-76534600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr11:76534400-76534600	Active TSS	Adipose Nuclei	Adipose
17	chr11:76534400-76534600	Flanking Active TSS	HUVEC	blood vessel
18	chr11:76534400-76534800	Enhancers	H1 Cell Line	embryonic stem cell
19	chr11:76534400-76534800	Enhancers	Osteobl	bone
20	chr11:76534400-76535200	Enhancers	Muscle Satellite Cultured Cells	--
21	chr11:76534400-76535200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr11:76534400-76535200	Enhancers	HSMM	muscle
23	chr11:76534400-76535400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
24	chr11:76534400-76535600	Enhancers	Right Atrium	heart
25	chr11:76534400-76535600	Flanking Active TSS	A549	lung
26	chr11:76534400-76535800	Enhancers	Primary neutrophils fromperipheralblood	blood
27	chr11:76534400-76535800	Flanking Active TSS	Hela-S3	cervix
28	chr11:76534400-76536800	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
29	chr11:76534400-76537200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
30	chr11:76534400-76537200	Enhancers	Placenta	Placenta
31	chr11:76534400-76537400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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