Variant report

Variant	rs368186949
Chromosome Location	chr1:144519552-144519553
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr1:144518792-144522545	GM12878	blood:	n/a	n/a
2	POU2F2	chr1:144518792-144522486	GM12878	blood:	n/a	chr1:144520062-144520074 chr1:144520578-144520590
3	TAF1	chr1:144519234-144521626	GM12891	blood:	n/a	n/a
4	RXRA	chr1:144519447-144520900	GM12878	blood:	n/a	chr1:144520030-144520050 chr1:144520504-144520518 chr1:144519989-144519996
5	POLR2A	chr1:144518839-144522559	GM12892	blood:	n/a	n/a
6	SIN3AK20	chr1:144519353-144519560	HepG2	liver:	n/a	n/a
7	POLR2A	chr1:144518804-144521678	Hela-S3	cervix:	n/a	n/a
8	PBX3	chr1:144519504-144520293	GM12878	blood:	n/a	n/a
9	EBF1	chr1:144519341-144521628	GM12878	blood:	n/a	chr1:144520018-144520027
10	TAF1	chr1:144519282-144521086	GM12892	blood:	n/a	n/a
11	POLR2A	chr1:144519396-144521306	PANC-1	pancreas:	n/a	n/a
12	POLR2A	chr1:144519339-144520849	H1-hESC	embryonic stem cell:	n/a	n/a
13	ZBTB33	chr1:144519251-144521076	GM12878	blood:	n/a	n/a
14	NFIC	chr1:144519138-144521206	GM12878	blood:	n/a	n/a
15	SPI1	chr1:144519504-144520846	GM12891	blood:	n/a	chr1:144520722-144520735 chr1:144520583-144520596
16	CEBPB	chr1:144519394-144520093	GM12878	blood:	n/a	n/a
17	REST	chr1:144519509-144520145	H1-hESC	embryonic stem cell:	n/a	n/a
18	SIX5	chr1:144519300-144519932	K562	blood:	n/a	n/a
19	SIX5	chr1:144519517-144520259	GM12878	blood:	n/a	n/a
20	TCF12	chr1:144519339-144521615	GM12878	blood:	n/a	chr1:144520354-144520364
21	PAX5	chr1:144519166-144521646	GM12878	blood:	n/a	n/a
22	EP300	chr1:144519204-144521169	GM12878	blood:	n/a	chr1:144519778-144519787 chr1:144520422-144520438 chr1:144519777-144519791 chr1:144520376-144520385
23	REST	chr1:144519540-144520937	H1-hESC	embryonic stem cell:	n/a	chr1:144520744-144520758 chr1:144520738-144520758 chr1:144520426-144520444
24	BATF	chr1:144519358-144521451	GM12878	blood:	n/a	n/a
25	SPI1	chr1:144519367-144520523	GM12878	blood:	n/a	n/a
26	POLR2A	chr1:144519511-144520870	HepG2	liver:	n/a	n/a
27	POLR2A	chr1:144519539-144520576	PANC-1	pancreas:	n/a	n/a
28	POLR2A	chr1:144518819-144522457	GM12891	blood:	n/a	n/a
29	POLR2A	chr1:144519094-144522384	GM12891	blood:	n/a	n/a
30	GABPA	chr1:144519202-144520912	Hela-S3	cervix:	n/a	chr1:144520733-144520742 chr1:144520735-144520744
31	POLR2A	chr1:144519292-144521612	GM12878	blood:	n/a	n/a
32	GATA2	chr1:144519552-144520113	K562	blood:	n/a	chr1:144519779-144519789
33	TCF3	chr1:144519469-144521653	GM12878	blood:	n/a	chr1:144520640-144520654
34	TAF1	chr1:144519187-144521331	GM12891	blood:	n/a	n/a
35	BATF	chr1:144519521-144519990	GM12878	blood:	n/a	n/a
36	POLR2A	chr1:144517833-144522689	H1-hESC	embryonic stem cell:	n/a	n/a
37	EP300	chr1:144519507-144520309	GM12878	blood:	n/a	chr1:144519778-144519787 chr1:144519777-144519791
38	HEY1	chr1:144519423-144521602	K562	blood:	n/a	chr1:144521328-144521343
39	SP1	chr1:144518660-144521209	GM12878	blood:	n/a	chr1:144520589-144520603 chr1:144520575-144520584 chr1:144520582-144520591 chr1:144520690-144520700 chr1:144520583-144520597 chr1:144520575-144520585 chr1:144519643-144519657 chr1:144519644-144519653 chr1:144520722-144520735 chr1:144520691-144520700 chr1:144519972-144519986 chr1:144520690-144520704 chr1:144520578-144520592
40	FOXM1	chr1:144519295-144520342	GM12878	blood:	n/a	n/a
41	POLR2A	chr1:144519283-144521652	GM12878	blood:	n/a	n/a
42	PAX5	chr1:144519411-144520311	GM12878	blood:	n/a	n/a
43	POLR2A	chr1:144519530-144519742	Raji	blood:	n/a	n/a
44	POLR2A	chr1:144518842-144521634	H1-hESC	embryonic stem cell:	n/a	n/a
45	POU2F2	chr1:144519348-144521079	GM12878	blood:	n/a	chr1:144520062-144520074 chr1:144520578-144520590
46	RXRA	chr1:144519314-144520672	HepG2	liver:	n/a	chr1:144520030-144520050 chr1:144520504-144520518 chr1:144519989-144519996
47	FOXA1	chr1:144519209-144520078	HepG2	liver:	n/a	n/a
48	POLR2A	chr1:144518659-144522505	GM12878	blood:	n/a	n/a
49	TCF12	chr1:144519353-144521468	GM12878	blood:	n/a	chr1:144520354-144520364
50	SP1	chr1:144518955-144522505	GM12878	blood:	n/a	chr1:144520589-144520603 chr1:144520575-144520584 chr1:144521845-144521852 chr1:144520582-144520591 chr1:144520690-144520700 chr1:144520583-144520597 chr1:144520575-144520585 chr1:144519643-144519657 chr1:144519644-144519653 chr1:144520722-144520735 chr1:144520691-144520700 chr1:144519972-144519986 chr1:144520690-144520704 chr1:144520578-144520592

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:144519367..144521165-chr1:144533246..144535069,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PPIAL4B-2	chr1:144514874-144519720	NONHSAT005809

Variant related genes	Relation type
ENSG00000236943	TF binding region
ENSG00000201699	Chromatin interaction

Extended variants
information (count: 44 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:44 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1003583	chr1:144007818-144543442	Bivalent Enhancer Weak transcription Genic enhancers Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	257 gene(s)	inside rSNPs	diseases
2	nsv1002681	chr1:144007818-144560590	Genic enhancers Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	257 gene(s)	inside rSNPs	diseases
3	nsv1012104	chr1:144007818-144682096	Weak transcription Strong transcription Enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	260 gene(s)	inside rSNPs	diseases
4	nsv1006330	chr1:144007818-144849544	Active TSS Strong transcription Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	262 gene(s)	inside rSNPs	diseases
5	nsv1001989	chr1:144007818-144873327	Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	265 gene(s)	inside rSNPs	diseases
6	nsv997949	chr1:144007818-144876884	Bivalent/Poised TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	265 gene(s)	inside rSNPs	diseases
7	nsv1010670	chr1:144007818-144880405	Flanking Bivalent TSS/Enh Enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	265 gene(s)	inside rSNPs	diseases
8	nsv1010163	chr1:144007818-144884322	Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	265 gene(s)	inside rSNPs	diseases
9	nsv1014985	chr1:144007818-144949963	Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	283 gene(s)	inside rSNPs	diseases
10	nsv1002373	chr1:144013582-144682096	Bivalent/Poised TSS Weak transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	258 gene(s)	inside rSNPs	diseases
11	nsv1007748	chr1:144015838-144682096	Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	258 gene(s)	inside rSNPs	diseases
12	nsv997876	chr1:144033939-144538748	Enhancers Flanking Active TSS Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	255 gene(s)	inside rSNPs	diseases
13	nsv524682	chr1:144034888-144617179	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	257 gene(s)	inside rSNPs	diseases
14	nsv1007246	chr1:144036737-144560590	Weak transcription Bivalent Enhancer Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	255 gene(s)	inside rSNPs	diseases
15	nsv1006612	chr1:144050098-144560590	Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	254 gene(s)	inside rSNPs	diseases
16	esv1831165	chr1:144094693-144520821	Active TSS Bivalent/Poised TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
17	esv1831653	chr1:144094693-144520821	Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
18	esv1828275	chr1:144274482-145098718	Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	304 gene(s)	inside rSNPs	diseases
19	esv1816945	chr1:144300531-144520821	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
20	nsv872205	chr1:144320413-144520547	Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
21	esv1828066	chr1:144321072-144520821	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
22	esv1832004	chr1:144321072-144520821	Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
23	esv1824612	chr1:144321072-144526927	Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
24	esv2512286	chr1:144321887-144560360	Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	251 gene(s)	inside rSNPs	diseases
25	esv1843150	chr1:144322804-144520821	Active TSS Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
26	esv1842762	chr1:144322804-144526927	Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
27	nsv1014641	chr1:144337917-144880405	Weak transcription Strong transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	259 gene(s)	inside rSNPs	diseases
28	nsv998833	chr1:144337917-144885032	Strong transcription ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	259 gene(s)	inside rSNPs	diseases
29	esv1827406	chr1:144383319-144520821	Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
30	nsv534082	chr1:144451745-144524956	Active TSS Weak transcription Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
31	esv10891	chr1:144451781-144526868	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
32	nsv1009682	chr1:144471974-144876884	Strong transcription Enhancers Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	255 gene(s)	inside rSNPs	diseases
33	nsv1008142	chr1:144471974-144880405	Weak transcription Strong transcription Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	255 gene(s)	inside rSNPs	diseases
34	nsv1001693	chr1:144471974-145290292	Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Weak transcription Genic enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	311 gene(s)	inside rSNPs	diseases
35	nsv946234	chr1:144493025-144533425	Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
36	esv1822219	chr1:144501844-144522535	Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
37	esv1850323	chr1:144501844-144522535	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
38	nsv8025	chr1:144502031-144527040	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
39	esv1819664	chr1:144502863-144522535	Active TSS Weak transcription Bivalent/Poised TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
40	esv1850837	chr1:144502863-144522535	Active TSS Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
41	esv20623	chr1:144503077-144526916	Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
42	nsv831292	chr1:144506093-144613511	Weak transcription Active TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	248 gene(s)	inside rSNPs	diseases
43	nsv946737	chr1:144510636-144527091	Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
44	esv3353489	chr1:144513995-144520493	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:88 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:144519000-144522000	Active TSS	Primary T helper cells fromperipheralblood	blood
2	chr1:144519200-144519600	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
3	chr1:144519200-144519600	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
4	chr1:144519200-144519600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr1:144519200-144520200	Active TSS	Dnd41	blood
6	chr1:144519200-144520800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr1:144519200-144520800	Active TSS	HUES48 Cell Line	embryonic stem cell
8	chr1:144519200-144520800	Active TSS	iPS-15b Cell Line	embryonic stem cell
9	chr1:144519200-144520800	Active TSS	iPS-18 Cell Line	embryonic stem cell
10	chr1:144519200-144520800	Active TSS	iPS-20b Cell Line	embryonic stem cell
11	chr1:144519200-144520800	Active TSS	Primary T helper naive cells fromperipheralblood	blood
12	chr1:144519200-144520800	Active TSS	Fetal Thymus	thymus
13	chr1:144519200-144521000	Active TSS	H1 Cell Line	embryonic stem cell
14	chr1:144519200-144521400	Active TSS	Right Atrium	heart
15	chr1:144519200-144521400	Active TSS	Osteobl	bone
16	chr1:144519200-144521600	Active TSS	ES-I3 Cell Line	embryonic stem cell
17	chr1:144519200-144521600	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
18	chr1:144519200-144521600	Active TSS	H9 Cell Line	embryonic stem cell
19	chr1:144519200-144521600	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr1:144519200-144521600	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr1:144519200-144521600	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr1:144519200-144521600	Active TSS	Primary T helper naive cells from peripheral blood	blood
23	chr1:144519200-144521600	Active TSS	Muscle Satellite Cultured Cells	--
24	chr1:144519200-144521600	Active TSS	Brain Hippocampus Middle	brain
25	chr1:144519200-144521600	Active TSS	Brain Inferior Temporal Lobe	brain
26	chr1:144519200-144521600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
27	chr1:144519200-144521800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr1:144519200-144521800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
29	chr1:144519200-144521800	Active TSS	Primary monocytes fromperipheralblood	blood
30	chr1:144519200-144521800	Active TSS	Primary hematopoietic stem cells short term culture	blood
31	chr1:144519200-144521800	Active TSS	Primary T helper 17 cells PMA-I stimulated	--
32	chr1:144519200-144521800	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
33	chr1:144519200-144521800	Active TSS	Primary T killer naive cells fromperipheralblood	blood
34	chr1:144519200-144521800	Active TSS	Primary T killer memory cells from peripheral blood	blood
35	chr1:144519200-144521800	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
36	chr1:144519200-144521800	Active TSS	Stomach Smooth Muscle	stomach
37	chr1:144519200-144521800	Active TSS	Thymus	Thymus
38	chr1:144519200-144521800	Active TSS	HMEC	breast
39	chr1:144519200-144522000	Active TSS	HUES6 Cell Line	embryonic stem cell
40	chr1:144519200-144522000	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
41	chr1:144519200-144522000	Active TSS	Primary B cells from cord blood	blood
42	chr1:144519200-144522000	Active TSS	Primary B cells from peripheral blood	blood
43	chr1:144519200-144522000	Active TSS	Primary T cells from cord blood	blood
44	chr1:144519200-144522000	Active TSS	Primary T cells fromperipheralblood	blood
45	chr1:144519200-144522000	Active TSS	Primary hematopoietic stem cells	blood
46	chr1:144519200-144522000	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
47	chr1:144519200-144522000	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
48	chr1:144519200-144522000	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
49	chr1:144519200-144522000	Active TSS	Pancreatic Islets	Pancreatic Islet
50	chr1:144519200-144522000	Active TSS	Rectal Mucosa Donor 29	rectum

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links