| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv599367 |
chr5:110924280-111602713 |
Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
30 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1015302 |
chr5:111339022-111802947 |
Enhancers Active TSS Strong transcription Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
26 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv537861 |
chr5:111339022-111802947 |
Strong transcription Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
26 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
esv2829846 |
chr5:111341445-111435769 |
Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
n/a
|
| 5 |
esv2763484 |
chr5:111352353-111371959 |
Weak transcription Enhancers Flanking Active TSS
|
lncRNA
|
n/a
|
inside rSNPs
|
n/a
|
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Last update: Aug 31, 2015