Variant report

Variant	rs368697220
Chromosome Location	chr12:41757525-41757526
allele	-/TTTCATTTGTTTGGGT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:11 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832383	chr12:41693298-41846934	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
2	nsv983384	chr12:41756923-41757967	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
3	esv3513265	chr12:41757342-41757574	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
4	esv3379371	chr12:41757345-41757648	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
5	esv3448082	chr12:41757379-41757575	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
6	esv3390732	chr12:41757399-41757545	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
7	esv5085	chr12:41757407-41757659	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
8	esv3436192	chr12:41757424-41757530	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
9	esv3513266	chr12:41757436-41757525	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
10	esv1158500	chr12:41757437-41757525	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
11	esv3513267	chr12:41757438-41757526	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:41755000-41759600	Weak transcription	Rectal Smooth Muscle	rectum
2	chr12:41755400-41760200	Enhancers	Brain Germinal Matrix	brain
3	chr12:41756600-41758400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr12:41756800-41758600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr12:41757000-41758600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr12:41757000-41759600	Weak transcription	Brain Hippocampus Middle	brain
7	chr12:41757400-41759600	Weak transcription	Fetal Kidney	kidney

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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