Variant report

Variant	rs368752503
Chromosome Location	chr7:124539348-124539349
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:124537777..124539651-chr7:124561497..124564089,2	K562	blood:

Extended variants
information (count: 12 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429809	chr7:123937674-124835925	Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
2	esv3446198	chr7:124358002-124586856	Flanking Bivalent TSS/Enh Strong transcription Weak transcription Bivalent/Poised TSS Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
3	nsv889134	chr7:124462081-124552802	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv889135	chr7:124462081-124584834	Enhancers Strong transcription Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
5	nsv464707	chr7:124486980-124572288	Strong transcription Weak transcription Flanking Active TSS Active TSS Enhancers ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
6	nsv608341	chr7:124486980-124572288	Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
7	nsv889136	chr7:124492038-124552802	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Active TSS Enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
8	esv1829082	chr7:124503189-124556473	ZNF genes & repeats Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
9	nsv889137	chr7:124513770-124584834	Weak transcription Flanking Active TSS Strong transcription Active TSS Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
10	nsv889138	chr7:124518766-124584834	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
11	esv2756137	chr7:124521049-124558049	Strong transcription Weak transcription Enhancers ZNF genes & repeats Active TSS Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
12	nsv525729	chr7:124538036-124549573	Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:81 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:124462200-124568200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
2	chr7:124466400-124540800	Weak transcription	Right Ventricle	heart
3	chr7:124466400-124562200	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr7:124466600-124563400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
5	chr7:124466800-124540800	Weak transcription	Gastric	stomach
6	chr7:124484200-124554400	Weak transcription	HUVEC	blood vessel
7	chr7:124490800-124540600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr7:124498200-124568800	Weak transcription	Brain Anterior Caudate	brain
9	chr7:124506600-124540600	Weak transcription	Aorta	Aorta
10	chr7:124506800-124540600	Weak transcription	Sigmoid Colon	Sigmoid Colon
11	chr7:124522800-124568400	Weak transcription	Brain Cingulate Gyrus	brain
12	chr7:124527600-124562200	Weak transcription	A549	lung
13	chr7:124527600-124569000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
14	chr7:124527600-124569000	Weak transcription	Rectal Mucosa Donor 29	rectum
15	chr7:124527800-124540400	Weak transcription	Cortex derived primary cultured neurospheres	brain
16	chr7:124527800-124540800	Weak transcription	Placenta	Placenta
17	chr7:124528000-124567400	Weak transcription	HepG2	liver
18	chr7:124528400-124542800	Weak transcription	Spleen	Spleen
19	chr7:124528800-124540400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
20	chr7:124529200-124542800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
21	chr7:124529800-124553400	Weak transcription	Skeletal Muscle Male	skeletal muscle
22	chr7:124529800-124564400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
23	chr7:124530000-124540800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
24	chr7:124530000-124569000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
25	chr7:124530200-124540600	Weak transcription	Fetal Muscle Leg	muscle
26	chr7:124530400-124540600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
27	chr7:124531000-124542600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr7:124531200-124540600	Weak transcription	Left Ventricle	heart
29	chr7:124531400-124540600	Weak transcription	H1 Cell Line	embryonic stem cell
30	chr7:124531400-124540600	Weak transcription	Fetal Intestine Large	intestine
31	chr7:124531400-124540800	Weak transcription	Fetal Muscle Trunk	muscle
32	chr7:124531400-124559800	Weak transcription	Ovary	ovary
33	chr7:124531600-124540800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
34	chr7:124531800-124540600	Weak transcription	Rectal Mucosa Donor 31	rectum
35	chr7:124532000-124540600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
36	chr7:124532000-124569000	Weak transcription	Duodenum Mucosa	Duodenum
37	chr7:124532200-124540600	Weak transcription	HUES6 Cell Line	embryonic stem cell
38	chr7:124532200-124540800	Weak transcription	Adipose Nuclei	Adipose
39	chr7:124532400-124540400	Weak transcription	Duodenum Smooth Muscle	Duodenum
40	chr7:124532400-124540600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
41	chr7:124532400-124540600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
42	chr7:124532400-124540600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr7:124532600-124552400	Weak transcription	Primary B cells from peripheral blood	blood
44	chr7:124532600-124562600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
45	chr7:124532600-124568400	Weak transcription	NHDF-Ad	bronchial
46	chr7:124532600-124568800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
47	chr7:124532600-124569000	Weak transcription	HSMM	muscle
48	chr7:124532800-124540200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
49	chr7:124532800-124540400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
50	chr7:124532800-124557000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood

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