Variant report

Variant rs368819269
Chromosome Location chr1:145277831-145277832
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145273200-145278000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr1:145273200-145281400 Strong transcription Osteobl bone
3 chr1:145276200-145278000 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
4 chr1:145276400-145278600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr1:145277000-145278000 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
6 chr1:145277000-145278000 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:145277000-145278600 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
8 chr1:145277000-145278600 ZNF genes & repeats Brain Hippocampus Middle brain
9 chr1:145277000-145278600 ZNF genes & repeats Fetal Muscle Leg muscle
10 chr1:145277000-145278600 ZNF genes & repeats Fetal Stomach stomach
11 chr1:145277000-145278600 ZNF genes & repeats A549 lung
12 chr1:145277000-145278800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
13 chr1:145277000-145278800 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
14 chr1:145277000-145279200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr1:145277200-145278600 ZNF genes & repeats Fetal Muscle Trunk muscle
16 chr1:145277200-145278800 ZNF genes & repeats Fetal Thymus thymus
17 chr1:145277400-145278000 Strong transcription Fetal Kidney kidney
18 chr1:145277400-145290600 Weak transcription Placenta Amnion Placenta Amnion
19 chr1:145277600-145278000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr1:145277600-145278200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr1:145277600-145278600 Strong transcription Primary neutrophils fromperipheralblood blood
22 chr1:145277600-145278600 Strong transcription Primary T cells from cord blood blood
23 chr1:145277600-145278600 Strong transcription Pancreas Pancrea
24 chr1:145277600-145278800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr1:145277600-145278800 Strong transcription HSMMtube muscle
26 chr1:145277600-145279200 Strong transcription Primary T helper cells fromperipheralblood blood
27 chr1:145277600-145279200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr1:145277600-145279200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr1:145277600-145280400 Strong transcription Monocytes-CD14+_RO01746 blood
30 chr1:145277600-145281200 Weak transcription Gastric stomach
31 chr1:145277600-145281200 Weak transcription Spleen Spleen
32 chr1:145277600-145281400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr1:145277600-145281400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr1:145277600-145281400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr1:145277600-145281400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr1:145277600-145281400 Weak transcription Primary T helper naive cells fromperipheralblood blood
37 chr1:145277600-145281400 Weak transcription Primary T killer naive cells fromperipheralblood blood
38 chr1:145277600-145281400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr1:145277600-145281400 Weak transcription Brain Angular Gyrus brain
40 chr1:145277600-145281400 Weak transcription Brain Anterior Caudate brain
41 chr1:145277600-145281400 Weak transcription Brain Germinal Matrix brain
42 chr1:145277600-145281400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr1:145277600-145281400 Weak transcription Brain Substantia Nigra brain
44 chr1:145277600-145281400 Weak transcription Colon Smooth Muscle Colon
45 chr1:145277600-145281400 Weak transcription Fetal Brain Female brain
46 chr1:145277600-145281400 Weak transcription Left Ventricle heart
47 chr1:145277600-145281400 Weak transcription Psoas Muscle Psoas
48 chr1:145277600-145281400 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr1:145277600-145281400 Weak transcription Rectal Smooth Muscle rectum
50 chr1:145277600-145281400 Weak transcription Right Atrium heart

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