Variant report

Variant	rs369022922
Chromosome Location	chr1:174901127-174901128
allele	-/GTT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:174889741..174892374-chr1:174899175..174902170,2	K562	blood:
2	chr1:174899181..174902088-chr1:174902250..174905277,3	K562	blood:

Variant related genes	Relation type
ENSG00000235869	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2755184	chr1:174388343-174970343	Flanking Active TSS Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	54 gene(s)	inside rSNPs	diseases
2	esv1794782	chr1:174900761-174925112	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:38 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:174861400-174902400	Weak transcription	Left Ventricle	heart
2	chr1:174874000-174910000	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr1:174874200-174938200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr1:174876800-174933600	Weak transcription	Aorta	Aorta
5	chr1:174886000-174907200	Weak transcription	Primary T cells from cord blood	blood
6	chr1:174886400-174911600	Weak transcription	Sigmoid Colon	Sigmoid Colon
7	chr1:174889600-174907400	Weak transcription	Primary B cells from cord blood	blood
8	chr1:174891800-174908600	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr1:174892200-174905000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
10	chr1:174893400-174907600	Weak transcription	GM12878-XiMat	blood
11	chr1:174897400-174903600	Weak transcription	Pancreas	Pancrea
12	chr1:174897400-174910000	Weak transcription	Gastric	stomach
13	chr1:174897800-174907200	Weak transcription	Duodenum Mucosa	Duodenum
14	chr1:174898800-174910600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
15	chr1:174899800-174915200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
16	chr1:174900000-174901600	Enhancers	Brain Hippocampus Middle	brain
17	chr1:174900000-174902200	Weak transcription	H1 Cell Line	embryonic stem cell
18	chr1:174900000-174902200	Enhancers	HUES64 Cell Line	embryonic stem cell
19	chr1:174900200-174901400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
20	chr1:174900200-174901400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
21	chr1:174900200-174901600	Enhancers	Cortex derived primary cultured neurospheres	brain
22	chr1:174900200-174901600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
23	chr1:174900400-174901200	Enhancers	Fetal Intestine Small	intestine
24	chr1:174900400-174902600	Enhancers	Brain Substantia Nigra	brain
25	chr1:174900600-174901800	Enhancers	Fetal Intestine Large	intestine
26	chr1:174900800-174901400	Weak transcription	HUES48 Cell Line	embryonic stem cell
27	chr1:174900800-174901600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
28	chr1:174900800-174902000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
29	chr1:174900800-174902000	Weak transcription	Brain Anterior Caudate	brain
30	chr1:174900800-174902000	Weak transcription	Brain Cingulate Gyrus	brain
31	chr1:174900800-174904600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
32	chr1:174900800-174907600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
33	chr1:174900800-174907600	Weak transcription	Rectal Mucosa Donor 29	rectum
34	chr1:174900800-174911000	Weak transcription	Brain Angular Gyrus	brain
35	chr1:174901000-174901400	Weak transcription	Brain Inferior Temporal Lobe	brain
36	chr1:174901000-174907800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
37	chr1:174901000-174909400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
38	chr1:174901000-174922200	Weak transcription	iPS-15b Cell Line	embryonic stem cell

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