The 2.0 version of rSNPBase

Variant report

Variant rs369156678
Chromosome Location chr5:112482576-112482577
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:112467400-112493200 Weak transcription Fetal Muscle Trunk muscle
2 chr5:112470200-112491000 Weak transcription Fetal Kidney kidney
3 chr5:112477000-112483200 Weak transcription H9 Cell Line embryonic stem cell
4 chr5:112477200-112483200 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr5:112477200-112485400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr5:112477400-112482600 Weak transcription NHLF lung
7 chr5:112477400-112486600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr5:112477400-112486600 Weak transcription Right Atrium heart
9 chr5:112477400-112489200 Weak transcription Fetal Muscle Leg muscle
10 chr5:112477400-112500600 Weak transcription Fetal Stomach stomach
11 chr5:112477600-112482600 Weak transcription HUES64 Cell Line embryonic stem cell
12 chr5:112477600-112482800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr5:112477600-112482800 Weak transcription HUES48 Cell Line embryonic stem cell
14 chr5:112477600-112483000 Weak transcription iPS-20b Cell Line embryonic stem cell
15 chr5:112478000-112483000 Weak transcription Left Ventricle heart
16 chr5:112478000-112485600 Weak transcription Pancreas Pancrea
17 chr5:112478000-112497000 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr5:112478400-112483000 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr5:112478600-112483000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr5:112478800-112483000 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr5:112479200-112485200 Weak transcription Liver Liver
22 chr5:112479200-112490000 Weak transcription Aorta Aorta
23 chr5:112479400-112489600 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr5:112479800-112485600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr5:112480400-112487200 Weak transcription Right Ventricle heart
26 chr5:112480600-112483600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
27 chr5:112480800-112483200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr5:112481000-112483000 Weak transcription Psoas Muscle Psoas
29 chr5:112481400-112496000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr5:112481600-112482800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr5:112481600-112483600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr5:112481600-112483600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr5:112481600-112483800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr5:112481600-112485400 Weak transcription Ovary ovary
35 chr5:112481800-112486400 Genic enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr5:112481800-112487800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr5:112482000-112482800 Weak transcription HMEC breast
38 chr5:112482000-112483000 Weak transcription NHEK skin
39 chr5:112482000-112483600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr5:112482000-112483600 Enhancers Osteobl bone
41 chr5:112482000-112484200 Enhancers HUES6 Cell Line embryonic stem cell
42 chr5:112482000-112484400 Enhancers Fetal Heart heart
43 chr5:112482200-112482600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr5:112482400-112482600 Enhancers Adipose Nuclei Adipose
45 chr5:112482400-112482800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr5:112482400-112483200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr5:112482400-112483400 Enhancers Muscle Satellite Cultured Cells --
48 chr5:112482400-112483600 Enhancers Fetal Adrenal Gland Adrenal Gland
49 chr5:112482400-112483600 Enhancers HSMMtube muscle
50 chr5:112482400-112483600 Enhancers NHDF-Ad bronchial

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Last update: Aug 31, 2015