Variant report

Variant rs369210646
Chromosome Location chr17:66511559-66511560
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:66507400-66513600 Active TSS Right Ventricle heart
2 chr17:66507600-66511600 Active TSS Ovary ovary
3 chr17:66507800-66511800 Active TSS Stomach Smooth Muscle stomach
4 chr17:66508000-66511800 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
5 chr17:66508800-66511800 Active TSS Right Atrium heart
6 chr17:66509400-66511600 Flanking Active TSS Rectal Smooth Muscle rectum
7 chr17:66509600-66513000 Weak transcription Spleen Spleen
8 chr17:66509600-66513400 Weak transcription Gastric stomach
9 chr17:66509600-66513600 Weak transcription Esophagus oesophagus
10 chr17:66509600-66525800 Weak transcription Pancreas Pancrea
11 chr17:66509800-66511600 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
12 chr17:66509800-66511800 Flanking Active TSS Brain Anterior Caudate brain
13 chr17:66509800-66511800 Flanking Active TSS Brain Hippocampus Middle brain
14 chr17:66509800-66514200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr17:66510000-66511600 Flanking Active TSS Adipose Nuclei Adipose
16 chr17:66510000-66511600 Flanking Active TSS Skeletal Muscle Male skeletal muscle
17 chr17:66510000-66511800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr17:66510000-66513400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr17:66510200-66511600 Genic enhancers Primary B cells from peripheral blood blood
20 chr17:66510200-66511600 Enhancers Primary T helper naive cells fromperipheralblood blood
21 chr17:66510200-66512800 Weak transcription Colonic Mucosa Colon
22 chr17:66510200-66513400 Weak transcription H9 Cell Line embryonic stem cell
23 chr17:66510400-66511600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
24 chr17:66510400-66511600 Enhancers Placenta Amnion Placenta Amnion
25 chr17:66510400-66511800 Enhancers Fetal Brain Male brain
26 chr17:66510400-66511800 Flanking Active TSS HUVEC blood vessel
27 chr17:66510600-66511600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr17:66510600-66511600 Flanking Active TSS Brain Substantia Nigra brain
29 chr17:66510600-66511600 Flanking Active TSS Colon Smooth Muscle Colon
30 chr17:66510600-66511600 Flanking Active TSS NH-A brain
31 chr17:66510800-66511600 Flanking Active TSS Muscle Satellite Cultured Cells --
32 chr17:66510800-66511600 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
33 chr17:66510800-66511600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
34 chr17:66510800-66511600 Flanking Active TSS NHDF-Ad bronchial
35 chr17:66510800-66511800 Flanking Active TSS Brain Angular Gyrus brain
36 chr17:66510800-66511800 Genic enhancers Hela-S3 cervix
37 chr17:66510800-66511800 Flanking Active TSS NHLF lung
38 chr17:66511000-66511600 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr17:66511000-66511600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr17:66511000-66511600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr17:66511000-66511600 Genic enhancers Primary B cells from cord blood blood
42 chr17:66511000-66511600 Flanking Active TSS Skeletal Muscle Female skeletal muscle
43 chr17:66511000-66511600 Enhancers Stomach Mucosa stomach
44 chr17:66511000-66511800 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr17:66511000-66511800 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
46 chr17:66511000-66511800 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
47 chr17:66511000-66511800 Flanking Active TSS Brain Cingulate Gyrus brain
48 chr17:66511000-66511800 Enhancers Lung lung
49 chr17:66511000-66511800 Transcr. at gene 5' and 3' GM12878-XiMat blood
50 chr17:66511000-66511800 Flanking Active TSS HMEC breast

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