The 2.0 version of rSNPBase

Variant report

Variant rs369405212
Chromosome Location chr11:59521587-59521588
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:59519000-59521600 Enhancers Primary neutrophils fromperipheralblood blood
2 chr11:59519600-59521600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr11:59520000-59521600 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr11:59521000-59521600 Enhancers Colonic Mucosa Colon
5 chr11:59521000-59521600 Bivalent Enhancer Fetal Brain Male brain
6 chr11:59521000-59521600 Enhancers Placenta Placenta
7 chr11:59521200-59521600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr11:59521200-59521600 Enhancers Primary monocytes fromperipheralblood blood
9 chr11:59521200-59521600 Bivalent Enhancer Primary T cells fromperipheralblood blood
10 chr11:59521200-59521600 Enhancers Primary Natural Killer cells fromperipheralblood blood
11 chr11:59521200-59521600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
12 chr11:59521200-59521600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr11:59521200-59521600 Enhancers Brain Cingulate Gyrus brain
14 chr11:59521200-59521600 Enhancers Brain Hippocampus Middle brain
15 chr11:59521200-59521600 Flanking Active TSS Duodenum Mucosa Duodenum
16 chr11:59521200-59521600 Bivalent Enhancer Fetal Muscle Trunk muscle
17 chr11:59521200-59521600 Enhancers K562 blood
18 chr11:59521200-59522000 Active TSS Rectal Smooth Muscle rectum
19 chr11:59521200-59523600 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr11:59521400-59521600 Active TSS HUES64 Cell Line embryonic stem cell
21 chr11:59521400-59521600 Active TSS iPS-18 Cell Line embryonic stem cell
22 chr11:59521400-59521600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
23 chr11:59521400-59521600 Active TSS Primary hematopoietic stem cells blood
24 chr11:59521400-59521600 Enhancers Primary hematopoietic stem cells short term culture blood
25 chr11:59521400-59521600 Enhancers Primary T helper naive cells fromperipheralblood blood
26 chr11:59521400-59521600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr11:59521400-59521600 Enhancers Brain Inferior Temporal Lobe brain
28 chr11:59521400-59521600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
29 chr11:59521400-59521600 Enhancers Duodenum Smooth Muscle Duodenum
30 chr11:59521400-59521600 Bivalent Enhancer Fetal Muscle Leg muscle
31 chr11:59521400-59521600 Enhancers Fetal Thymus thymus
32 chr11:59521400-59521600 Enhancers Thymus Thymus
33 chr11:59521400-59521600 Enhancers Dnd41 blood
34 chr11:59521400-59521600 Enhancers GM12878-XiMat blood
35 chr11:59521400-59521600 Enhancers HSMM muscle
36 chr11:59521400-59521600 Enhancers Monocytes-CD14+_RO01746 blood
37 chr11:59521400-59521600 Enhancers NHEK skin
38 chr11:59521400-59521800 Active TSS iPS-15b Cell Line embryonic stem cell
39 chr11:59521400-59521800 Active TSS Primary T helper cells PMA-I stimulated --
40 chr11:59521400-59521800 Active TSS Fetal Brain Female brain
41 chr11:59521400-59521800 Active TSS Hela-S3 cervix
42 chr11:59521400-59522000 Active TSS Primary T cells from cord blood blood
43 chr11:59521400-59522000 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
44 chr11:59521400-59522400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
45 chr11:59521400-59522400 Flanking Active TSS Stomach Smooth Muscle stomach
46 chr11:59521400-59523400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
47 chr11:59521400-59523400 Active TSS Brain Angular Gyrus brain
48 chr11:59521400-59523600 Active TSS Rectal Mucosa Donor 29 rectum
49 chr11:59521400-59523800 Active TSS HUES6 Cell Line embryonic stem cell
50 chr11:59521400-59524000 Active TSS H9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015