The 2.0 version of rSNPBase

Variant report

Variant rs369488273
Chromosome Location chr2:48024415-48024416
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:48011800-48026200 Weak transcription Stomach Mucosa stomach
2 chr2:48012000-48024600 Weak transcription Aorta Aorta
3 chr2:48012000-48024600 Weak transcription Rectal Smooth Muscle rectum
4 chr2:48012000-48024800 Weak transcription NHEK skin
5 chr2:48012000-48026000 Weak transcription Esophagus oesophagus
6 chr2:48012000-48026000 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr2:48012000-48026200 Weak transcription Gastric stomach
8 chr2:48012200-48024600 Weak transcription Right Ventricle heart
9 chr2:48012200-48026000 Weak transcription Small Intestine intestine
10 chr2:48012200-48030000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr2:48012600-48065000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr2:48013400-48025800 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr2:48015000-48029600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr2:48016000-48029600 Strong transcription Fetal Thymus thymus
15 chr2:48016200-48029600 Strong transcription Fetal Stomach stomach
16 chr2:48016200-48030000 Strong transcription HUES6 Cell Line embryonic stem cell
17 chr2:48016200-48050400 Strong transcription iPS-20b Cell Line embryonic stem cell
18 chr2:48016400-48029800 Strong transcription HUES64 Cell Line embryonic stem cell
19 chr2:48016600-48025800 Strong transcription Primary hematopoietic stem cells short term culture blood
20 chr2:48016600-48030000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr2:48016800-48030200 Strong transcription Fetal Muscle Leg muscle
22 chr2:48017000-48036200 Strong transcription H1 Cell Line embryonic stem cell
23 chr2:48017000-48049400 Strong transcription Fetal Intestine Large intestine
24 chr2:48017200-48024800 Strong transcription Fetal Adrenal Gland Adrenal Gland
25 chr2:48017200-48025800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr2:48017200-48053200 Strong transcription HUES48 Cell Line embryonic stem cell
27 chr2:48017400-48032200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr2:48017400-48049600 Strong transcription Primary T cells fromperipheralblood blood
29 chr2:48017800-48037800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr2:48018000-48025800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr2:48018000-48030200 Strong transcription Brain Germinal Matrix brain
32 chr2:48018000-48030400 Strong transcription Primary T helper cells fromperipheralblood blood
33 chr2:48018200-48030200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr2:48018200-48030200 Strong transcription Fetal Brain Female brain
35 chr2:48018200-48030600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr2:48018400-48024800 Weak transcription Pancreas Pancrea
37 chr2:48018400-48029200 Strong transcription A549 lung
38 chr2:48018400-48030200 Strong transcription Primary B cells from peripheral blood blood
39 chr2:48018600-48026600 Strong transcription Fetal Intestine Small intestine
40 chr2:48018600-48027400 Weak transcription Psoas Muscle Psoas
41 chr2:48018600-48030200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
42 chr2:48018800-48024600 Weak transcription Spleen Spleen
43 chr2:48019600-48030600 Strong transcription Liver Liver
44 chr2:48019800-48026600 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr2:48020800-48030200 Strong transcription Cortex derived primary cultured neurospheres brain
46 chr2:48020800-48030400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr2:48021000-48029800 Strong transcription Breast Myoepithelial Primary Cells Breast
48 chr2:48021200-48029000 Strong transcription HMEC breast
49 chr2:48021200-48030400 Strong transcription Fetal Lung lung
50 chr2:48021200-48036200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015