Variant report

Variant rs369540090
Chromosome Location chr3:154798932-154798933
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:154796000-154802200 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
2 chr3:154796200-154799600 Active TSS ES-I3 Cell Line embryonic stem cell
3 chr3:154796200-154799600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
4 chr3:154796400-154799000 Active TSS Placenta Amnion Placenta Amnion
5 chr3:154796400-154799200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
6 chr3:154796400-154800000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr3:154796400-154800000 Active TSS NHLF lung
8 chr3:154796600-154799000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr3:154796600-154799000 Active TSS H9 Cell Line embryonic stem cell
10 chr3:154796600-154799000 Active TSS ES-UCSF4 Cell Line embryonic stem cell
11 chr3:154796600-154799000 Active TSS Placenta Placenta
12 chr3:154796600-154799200 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
13 chr3:154796600-154800000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr3:154796600-154800200 Active TSS Psoas Muscle Psoas
15 chr3:154796600-154800600 Active TSS Breast Myoepithelial Primary Cells Breast
16 chr3:154796600-154802000 Active TSS Duodenum Mucosa Duodenum
17 chr3:154796800-154799400 Active TSS NHDF-Ad bronchial
18 chr3:154796800-154799600 Active TSS Muscle Satellite Cultured Cells --
19 chr3:154796800-154801200 Active TSS Fetal Kidney kidney
20 chr3:154797000-154799000 Active TSS HSMMtube muscle
21 chr3:154797000-154799600 Active TSS Skeletal Muscle Female skeletal muscle
22 chr3:154797200-154799200 Active TSS Dnd41 blood
23 chr3:154797200-154801000 Active TSS Fetal Intestine Small intestine
24 chr3:154797400-154799000 Flanking Active TSS Liver Liver
25 chr3:154797800-154799000 Bivalent/Poised TSS IMR90 fetal lung fibroblasts Cell Line lung
26 chr3:154797800-154799200 Flanking Active TSS HMEC breast
27 chr3:154798200-154799000 Flanking Active TSS Primary B cells from cord blood blood
28 chr3:154798200-154799000 Active TSS Fetal Adrenal Gland Adrenal Gland
29 chr3:154798200-154799000 Enhancers K562 blood
30 chr3:154798200-154799200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr3:154798200-154800000 Active TSS Brain Anterior Caudate brain
32 chr3:154798200-154808600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr3:154798200-154812600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr3:154798400-154799000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
35 chr3:154798400-154799000 Bivalent/Poised TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr3:154798400-154799200 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
37 chr3:154798600-154799000 Flanking Active TSS Skeletal Muscle Male skeletal muscle
38 chr3:154798600-154799000 Flanking Active TSS Thymus Thymus
39 chr3:154798600-154799000 Flanking Active TSS HSMM muscle
40 chr3:154798600-154799200 Flanking Bivalent TSS/Enh iPS-18 Cell Line embryonic stem cell
41 chr3:154798600-154799200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
42 chr3:154798600-154799200 Flanking Active TSS Osteobl bone
43 chr3:154798600-154799400 Flanking Bivalent TSS/Enh iPS-20b Cell Line embryonic stem cell
44 chr3:154798600-154803800 Weak transcription Right Atrium heart
45 chr3:154798800-154799000 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
46 chr3:154798800-154799000 Flanking Active TSS iPS DF 6.9 Cell Line embryonic stem cell
47 chr3:154798800-154799000 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
48 chr3:154798800-154799000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr3:154798800-154799000 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr3:154798800-154799000 Active TSS Adipose Nuclei Adipose

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