Variant report

Variant	rs369541487
Chromosome Location	chr14:55797680-55797681
allele	-/CTTG
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:55795389..55798237-chr14:55800150..55802367,2	MCF-7	breast:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1039438	chr14:55746585-55886099	Genic enhancers Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
2	esv3405710	chr14:55797224-55800072	Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	esv3429893	chr14:55797549-55799747	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:104 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:55777200-55799000	Weak transcription	Colon Smooth Muscle	Colon
2	chr14:55777400-55799200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr14:55779200-55798800	Weak transcription	K562	blood
4	chr14:55779200-55817600	Weak transcription	Hela-S3	cervix
5	chr14:55779600-55799600	Weak transcription	Rectal Smooth Muscle	rectum
6	chr14:55779600-55801200	Weak transcription	Esophagus	oesophagus
7	chr14:55779800-55800800	Weak transcription	Adipose Nuclei	Adipose
8	chr14:55780000-55797800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
9	chr14:55780200-55807800	Weak transcription	Thymus	Thymus
10	chr14:55780600-55799000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
11	chr14:55780600-55800600	Weak transcription	NHEK	skin
12	chr14:55780600-55806200	Weak transcription	HMEC	breast
13	chr14:55780800-55799400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
14	chr14:55780800-55800800	Weak transcription	Lung	lung
15	chr14:55780800-55817200	Weak transcription	Fetal Muscle Trunk	muscle
16	chr14:55781400-55799600	Weak transcription	NH-A	brain
17	chr14:55782000-55817200	Weak transcription	HSMM	muscle
18	chr14:55783000-55798800	Weak transcription	Liver	Liver
19	chr14:55783200-55799400	Weak transcription	Fetal Thymus	thymus
20	chr14:55783600-55799000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr14:55783600-55799400	Weak transcription	Pancreas	Pancrea
22	chr14:55783600-55800800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
23	chr14:55783800-55799400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
24	chr14:55784000-55799800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
25	chr14:55784200-55801200	Weak transcription	Fetal Stomach	stomach
26	chr14:55784600-55799400	Weak transcription	HSMMtube	muscle
27	chr14:55784600-55800800	Weak transcription	Gastric	stomach
28	chr14:55784800-55798800	Weak transcription	Duodenum Mucosa	Duodenum
29	chr14:55784800-55799600	Weak transcription	Fetal Kidney	kidney
30	chr14:55785800-55799000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
31	chr14:55785800-55799200	Weak transcription	Primary hematopoietic stem cells	blood
32	chr14:55786000-55798800	Weak transcription	Fetal Intestine Large	intestine
33	chr14:55786000-55799000	Weak transcription	A549	lung
34	chr14:55786000-55799000	Weak transcription	Dnd41	blood
35	chr14:55786800-55803000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
36	chr14:55787200-55798800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
37	chr14:55787200-55806600	Weak transcription	Fetal Muscle Leg	muscle
38	chr14:55787800-55798800	Weak transcription	Fetal Intestine Small	intestine
39	chr14:55788600-55799400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
40	chr14:55788800-55800800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
41	chr14:55790400-55806800	Weak transcription	Aorta	Aorta
42	chr14:55790800-55799400	Weak transcription	Left Ventricle	heart
43	chr14:55791800-55800200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
44	chr14:55791800-55817200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr14:55792600-55798800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
46	chr14:55792600-55799000	Enhancers	Primary T helper cells fromperipheralblood	blood
47	chr14:55793000-55808600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
48	chr14:55793200-55800800	Weak transcription	Brain Hippocampus Middle	brain
49	chr14:55793800-55799000	Weak transcription	Brain Inferior Temporal Lobe	brain
50	chr14:55794000-55801000	Weak transcription	Right Ventricle	heart

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